Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1504 |
Symbol | |
ID | 3746966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1971392 |
End bp | 1975333 |
Gene Length | 3942 bp |
Protein Length | 1313 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637774044 |
Product | TPR repeat-containing protein |
Protein accession | YP_379803 |
Protein GI | 78189465 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGAAC CTTTAGTGCT GACACCAAGC GTTGACATTG TAACGCAACA TCCCGCATTG ATACGACAAA CCGCAGAGCT TTCTCGTTTG TATAAAGATA AAGAGGTACT TGTAACTGAC GAAGTGTTAC AAGCAATTGG CAGCATCTTA TGGCGTTTGC TTGATGCTGA TGAAGCGCTT GCCAATGCCA AACAACGTGC GGGGCAGCAT ATTGTGCCGC TTTTACTCTC AAGCAATGAT GCTGCAATAC AGCAGCTTCC TTGGGAAACT ATCTATCATC CTGACTACGG TTTTCTTGCT CGGCACGAAG GGTTTACCTT TTCCCGCACT ATTCCATCAG TACAAAAAGC ATTACCTGAT GCAGCAAAAG GTCCATTGCG CATTTTGCTC TTTTCTTCAT TGCCTGATGA TCTTACTGAA AAGGAGCAAT TGCAGATTGA GGTAGAGCAA GCGGCAGTGC TTGAAGCACT TGGTGAGTGG CGGCAAAGCG GGCATGTGGT ACTTGAAATG CCTGATGACG GGCGCTTTAG TGAGTTTACG CAGGTGCTTA AATCGTTTAA ACCGCATGTT GTTTATCTCA GTGGGCATGG CATGTTTCAG CACGATGCGC TTAACCACAC CACAACAGGA TATTTCTTTT TTGAAGATGA AGTAAGTGGT AAGAGTAAAG CGTTTTCAGA AGCCGAGATA GCCGCAGCAT TGACCGCTAC AGCGGTGCAA GCCGTTATTG TGTCGGCATG TGAATCGGGC AAAGCAGCAT CCGATAGCTT GGTGAATGGT TTAACCTATC GCTTATTGCA GCAAGGTATT CCGCACGTTA TTGGTATGCG TGAATCTATT CTTGATAGAG CAGGCATTCA GTTTGCTCAA GCATTTTTTA GCGCGTTGAT GGAAAGGCAC GGTATTGCCG AAGCGTTACA ACAGGCGCGT AACGCTATTG TGCTGCCATT GCAAGAGGAT GAAGAATTTA AAGATACCGT TGAAGCCTCC ATTTCGTTAG GGCAGTGGTG TTTGCCGATG TTGTTTAGCC ATCAGTATAA CCGCGCCTTG CTTGATTGGG AGTTTACGCC GCAGCCAATG CGGGCTGAAA ATCGCCGAAA TAAGAGCTTT AAGCAAATTA AATCACTCCC CAACAGATTT ATTGGTCGTC GTCGTGAATT ACGAAAATGG CAAAGAAAGT TTCGTAGTGG AAAACAAAAT GCACTTTTAT TAACAGGTGC TGGAGGCATC GGAAAAACAG CTCTTTCGTA TAAGCTCATT ATGGGATTGA AACATGATGG GTATGAAGTT TTTTGCCTTT CATTCCGCCC CGAAGATAAT TGGCGCAAGT ATCTCACCTC TGAAATACCG TTTTCGTTAG ATGAGCACCG TAAGAATGAA TTTAAGGATC GGATAGCCGA CAATTCAGAT ATTGTCTTTC AAGCTGAATG CCTCTTTACC TTGCTTCTTG AACAATTCAA CGGCAAGGTA GCCATACTGT TTGATAACCT TGAATCGGTG CAAGATTCGG TTACTCGCCA TCTGATTGAT GCAGAACTGC AACAGCTTAT TGATATGGCA TTGGCATTAG AAAGCGATGG TCTGCGTATG CTCCTTACCT CACGTTATGC CTTGCCACAT TGGGACAATT CGTTAGTCTA TCCACTTGGC AATCCCGTTT ATCGTGATTT TTTAGCGGTG GCTCAACAGC AAAAGCTGCC AAAAGAGTTT TTTAAGGATG ATAAGGGTAA GCGCACCTAT AAGCGTTTAC GCCAAGCATA CGAGGTGTTA GGTGGAAACT TTCGGGCGCT TGAGTTTTTT GCGGCTGCAC TCCAAACCAT GAATGCTGCT GAAGAGCAGG ATTTTCTTAA TGGATTGAAA AGTGCTACCG AACAAATTCA AACCAACATG CTGCTTGAAA AGGTGTGGAG TTATCGCAAT CAAGAAGAGC AAGAGCTGCT TTGTGCTTTA ACGGCGTACC AAAACGCGGT TGCGCTTGAT GGCATAAAAG CGCTCAACTT ACCAACCATG CAGCAAAGCG AGGAGTTTGT GCGTGCTTTA GTTGCTGTGT CGCTTGTTGA GCAGTATGAA AATAAAGTAT GGGATGTAAA AGAGGAGTTT TTAGTTGCGC CGCTTGTACG TGATTGGTTG CAAAAACAAG GAGTTGCAAC CTTACCGATA GAGTTGTTGC AACGGGCAGC ACGCTATCAG CAGTGGTTGT TAGAAAATGA ACGCAGAACA TTTGAGCAAG CAACCATAAC TCATGCTGCG TTAATGGCAG CCGGATTAAA TGATGAAGCG CATCGTGTTA CGCTGGACTG GATTGTTACC CCAATGAATA TGGCTGGCTT ATACCAAGCA CTGCTTGATA GTTGGCTACT ACCGGCATGT TATGCGGTTG ATAAACAGAT TTTATCGGAA ACATTAGGGC AAACAGGGAA GCAATACCAT CATCTTGCGC AGTATAGCAC CGCTCTCGAC TACTTGAAAC GTTCCCTCGC TATTGTAGAA GAAATCGGCG ACAAGTCGGG CGAAGGAACA ACCCTCAATA ACATTTCGCA AATTTATGAT GCACGCGGAG ACTATGACAC CGCTCTCGAC TACTTGAAAC GATCGCTCGC TATTGTAGAA GAAATTGGAG ATAAAGCACG TGTAGGTGCA GCGCTCAATA ACATTTCGCA AATATTTAAA GCACGCGGAG ACTATGACAC TGCACTTGAC TACTTGAAAC GTTCCCTTAA TATAAGGCAG GAGATCGGCG ACAAGTCGGG CGAAGGGGTC ACACTGAATA ATATTTCACA AATATTTAAA GCATGGAGCG ACTATGACAC CGCTCTCGAC TATTTGAAAC GTTCCTTTGC TATAAGGCAG GAGATCGGCG ATAAGAAAGG CGAAGGCACT ACACTTGACA ATATTGGTAA AATTTACCTT GCAAAAGGCG ACTATGACAC TGCACTTGAT TACTTGAAAC GTTCCTTTAC TATAACGCAT GAGATCGGCG ACAAGAAAGG CGAAGGAACA ACCCTCAATA ACATTTCGCA AATATTTCAA GCACGCGGCG ACTATGACAT CGCTCTCGAC TACTTGAAAT GCTCGCTCGT TATCCAGCAG GAAATCGGGG ACAAGTCAGG CGAAGGAACA ACCCTCAATA ACATTTCGCA AATTTATGAT GCACGCGGAG ACTATGACAC CGCTCTCGAC TACTTGAAAC GTTCCCTCGC TATCCAGCAG GAAATCGGCG ACAAGTCGGG CGAAGGAACA ACCCTCAATA ACATTTCGCA AATTTATGAT GCACGCGGAG ACTATGACAC CGCTCTCGAC TACTTGAAAC GTTCCCTCGC TATCCAGCAG GAAATCGGCG ACAAGTCGGG CGAAGGAACA ACCCTCAATA ACATTTCGCA AATTTATGAT GCACGCGGAG ACTATGACAC CGCTCTCGAC TACTTGAAAC GCTCGCTCGC TATAAGGCAG GAAATCGGCG ACAAGTCGGG CGAAGGAACA ACCCTCAATA ATATTTCGGC ATTATATCAT GCACGCGGCG ACTATGACAC CGCTCTCGAC TACTTGAAAC GCTCGCTCGC TATTGCACAG GAAATCGGGG ACAAGTCGGG CGAAGGAACA ACCCTCAATA ACATTTCGGC ATTATATCAT GCACGCGGCG ACTATGACAC CGCTCTCGAC TACTTGAAAC GTTCGCTCGC TATAAGGCAG GAAATTGGCG ATGTTGCAGG GTTATGTGCA ACACTGATTA ATATGGGGCA TATTTATCTG CAAAATAATG AGATACAAGA TGCTGTATCA GCATGGGTAA CGGCATATAC GTTAGCACGT AAAATTGGGT ATGCTCAAGC CCTTGATGCG TTAGAAAATC TTGCACAACA GCTTGGTTTA CCCAATGGGC TTGCAGGTTG GGAAATGCTG GCAAGGCAAA TGGGTGAGGT TAATTCGTTT AATAGGGAAT AA
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Protein sequence | MVEPLVLTPS VDIVTQHPAL IRQTAELSRL YKDKEVLVTD EVLQAIGSIL WRLLDADEAL ANAKQRAGQH IVPLLLSSND AAIQQLPWET IYHPDYGFLA RHEGFTFSRT IPSVQKALPD AAKGPLRILL FSSLPDDLTE KEQLQIEVEQ AAVLEALGEW RQSGHVVLEM PDDGRFSEFT QVLKSFKPHV VYLSGHGMFQ HDALNHTTTG YFFFEDEVSG KSKAFSEAEI AAALTATAVQ AVIVSACESG KAASDSLVNG LTYRLLQQGI PHVIGMRESI LDRAGIQFAQ AFFSALMERH GIAEALQQAR NAIVLPLQED EEFKDTVEAS ISLGQWCLPM LFSHQYNRAL LDWEFTPQPM RAENRRNKSF KQIKSLPNRF IGRRRELRKW QRKFRSGKQN ALLLTGAGGI GKTALSYKLI MGLKHDGYEV FCLSFRPEDN WRKYLTSEIP FSLDEHRKNE FKDRIADNSD IVFQAECLFT LLLEQFNGKV AILFDNLESV QDSVTRHLID AELQQLIDMA LALESDGLRM LLTSRYALPH WDNSLVYPLG NPVYRDFLAV AQQQKLPKEF FKDDKGKRTY KRLRQAYEVL GGNFRALEFF AAALQTMNAA EEQDFLNGLK SATEQIQTNM LLEKVWSYRN QEEQELLCAL TAYQNAVALD GIKALNLPTM QQSEEFVRAL VAVSLVEQYE NKVWDVKEEF LVAPLVRDWL QKQGVATLPI ELLQRAARYQ QWLLENERRT FEQATITHAA LMAAGLNDEA HRVTLDWIVT PMNMAGLYQA LLDSWLLPAC YAVDKQILSE TLGQTGKQYH HLAQYSTALD YLKRSLAIVE EIGDKSGEGT TLNNISQIYD ARGDYDTALD YLKRSLAIVE EIGDKARVGA ALNNISQIFK ARGDYDTALD YLKRSLNIRQ EIGDKSGEGV TLNNISQIFK AWSDYDTALD YLKRSFAIRQ EIGDKKGEGT TLDNIGKIYL AKGDYDTALD YLKRSFTITH EIGDKKGEGT TLNNISQIFQ ARGDYDIALD YLKCSLVIQQ EIGDKSGEGT TLNNISQIYD ARGDYDTALD YLKRSLAIQQ EIGDKSGEGT TLNNISQIYD ARGDYDTALD YLKRSLAIQQ EIGDKSGEGT TLNNISQIYD ARGDYDTALD YLKRSLAIRQ EIGDKSGEGT TLNNISALYH ARGDYDTALD YLKRSLAIAQ EIGDKSGEGT TLNNISALYH ARGDYDTALD YLKRSLAIRQ EIGDVAGLCA TLINMGHIYL QNNEIQDAVS AWVTAYTLAR KIGYAQALDA LENLAQQLGL PNGLAGWEML ARQMGEVNSF NRE
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