| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1482 |
|---|
| Symbol | |
|---|
| ID | 3747973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1950687 |
|---|
| End bp | 1952585 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637774017 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_379781 |
|---|
| Protein GI | 78189443 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.412364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTT TTTTGCGATT ATTCCGCTAT CTCTTACCTT CCAAAGGAAA AATAGCACTT
GTTGTAGTAG TAAGCATGAT AACATCTTTA CTTGGTGTTA TCTCTATCTA TTCCATATTA
CCATTACTTA ATGCTGTTTT CACTGCCGAT AAAACTATTG AAGCTCCCAT TAAACCCCAA
GAAGAAAAAA AGAACAATAA AGAAAAAGTT GAACTTACCG ATACTAAGCA GGCGTTAGGA
TTACAAAAAT TTGATAGTAA AAAAATAAAA GAATCTGCTA CAGAGTGGTT TCAACAATCA
TTTTATGCAG AAACAAAAGA AAAGACATTA TTTAATATAT GCCTTTTTTT AATAGCCTCA
TTTGCCATAA AAAACTTTTT TAGTTATCTC AATGGTCAAT TAATTTTTAG AGTTCAAACA
AAAACAGCAA AAAAATTACG AGATGATGTT TTTAACAGCA TCATCGAAAT GCACCTCGAC
TATTTTAATA AAAATCGTGT TGGCAATTTA ATGAACCTTG TTTATAACGA TGTTCAGGCT
GTAAATAATA CCATTAATTC TACGTTTGTT AATTTTCTCC AAAATCCATT CTCTATTTTT
GTTTATGTAA GTGTGCTTAT TATGCTAAGC TGGAAGCTAA CACTTTTTGC CGCATTTACC
TCCCTCTTGA TATTTTTTGT TATTAGAACT ATTGGTAAAC GAGTAAAAGG ATTGGCTACT
ACTTTTCGTA GCACTATGGG AGATATGAAC TCCGTCTTAC AAGAAAAGTT TAGTGGAATA
AAAGTTATTA AATCAAGTGC GTTTGAAAAT GTTGAAATGC AACGTTTTCA AGAATTTACT
CGTGGCTTTA GAGTTTTAGA TATAAAAATT GCACAGCTTC GTAATATTAT AGGACCTCTC
AATGAAACAT TGCTTGTATC GGCAATTGCC TTAGTCCTTT GGTTTGGAGG ACTTCAGGTT
TTTGCGGGAG AAATGACCTC ATCAGAGTTA ATGCTTTTTG CATTTACCTT GTATTCTACA
ATGGGTCCTA TTAAAATGTT TGGTGATGTA AATACTCAAA TGGCGCTTGG AATGATATCT
GCAGAGCGAC TTTTTGAGTT ACTTGATGCA CAGCCCGATA TTAAAAATGG CACTCGCCCA
ATTAATGGGT TTTCTCATAA CATTTGTTTT GAGGATGTTT GCTTTAAATA TAGTAAAGAT
GCCGATACTC CTAATGTGCT TGATCATGTA TCATTTGAAA TAAAAAAAGG GGAGATGGTT
GCGCTTGTAG GGCAGTCAGG TTCAGGTAAA TCAACAACAG TAGATTTGCT TCTTCGTTTT
TATGATGTTG ATTCGGGGCG CATAACTATT GATGGTGTTG ATATTCGTGA GCTTGACTAT
AAGCAACTAC GTCGCATGAT TGGTGTTGTT AGCCAAGAAG TTATTTTATT TAATGATACT
ATTAAAGCAA ACATTGCTTA TGGTACGCAT CAAGAGGTAA CAGAAGAGCG ACTTATGGCA
GCCGTTAGGA TGGGAAATGC TCATCAGTTT ATTGAAGAGA AGCCTGAAAA GTATGACACG
CTTATTGGCG ACAGAGGTGT GCAGCTTTCC GGTGGTCAAC GCCAACGACT TGCTATTGCA
CGAGCAATGG TTAAAAATCC AGAATTATTG ATTTTTGATG AAGCTACCAG TGCGCTTGAT
AATGAATCAG AAAAAGTAGT GCAACAAGCC ATTGATCATG CGCTCGAAAA TCGTACTGCG
CTTGTTGTTG CCCATCGCCT TTCAACGGTT CGTAATGCTG ATTGTATTAT TGTAATGGAT
AGGGGGCATG TTGCTGAATC TGGTAGTCAT GATGAGTTGT TGCTGCATGG TGGTTTGTAC
AAACATTTGT ATGATATACA GTTTGTGGGG AAAAATTAA
|
|---|
| Protein sequence | MNLFLRLFRY LLPSKGKIAL VVVVSMITSL LGVISIYSIL PLLNAVFTAD KTIEAPIKPQ
EEKKNNKEKV ELTDTKQALG LQKFDSKKIK ESATEWFQQS FYAETKEKTL FNICLFLIAS
FAIKNFFSYL NGQLIFRVQT KTAKKLRDDV FNSIIEMHLD YFNKNRVGNL MNLVYNDVQA
VNNTINSTFV NFLQNPFSIF VYVSVLIMLS WKLTLFAAFT SLLIFFVIRT IGKRVKGLAT
TFRSTMGDMN SVLQEKFSGI KVIKSSAFEN VEMQRFQEFT RGFRVLDIKI AQLRNIIGPL
NETLLVSAIA LVLWFGGLQV FAGEMTSSEL MLFAFTLYST MGPIKMFGDV NTQMALGMIS
AERLFELLDA QPDIKNGTRP INGFSHNICF EDVCFKYSKD ADTPNVLDHV SFEIKKGEMV
ALVGQSGSGK STTVDLLLRF YDVDSGRITI DGVDIRELDY KQLRRMIGVV SQEVILFNDT
IKANIAYGTH QEVTEERLMA AVRMGNAHQF IEEKPEKYDT LIGDRGVQLS GGQRQRLAIA
RAMVKNPELL IFDEATSALD NESEKVVQQA IDHALENRTA LVVAHRLSTV RNADCIIVMD
RGHVAESGSH DELLLHGGLY KHLYDIQFVG KN
|
|---|
| |