| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1468 |
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| Symbol | |
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| ID | 3746437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1934171 |
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| End bp | 1934641 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637774002 |
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| Product | putative PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_379767 |
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| Protein GI | 78189429 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR00848] PTS system, fructose subfamily, IIA component |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.039328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG AAAGCCTTCT TTCCGAATCC TATGTTGCCC TGAACCTTGA GTTGGTTCAA
AAAAGTCAGG TGATTGCAAC CATGCTCTCT ATTGTAGAGC GCCATCCTGC CGTTAGCGAC
AATGTTAAAC TACGCGCTGA TGTGCTCAAG CGTGAGCAAG AAATGTCCAC CGGTATAGGT
AAAAGCCTTG CGTTGCCCCA TGCTAAAAGT GCGGCGGTTA GCCAACCGGT TATTGCTTTT
GCCACGTTAA AAAAAGCGTT GGATTTTGAT TCCATTGATG GCGAACCAGT GCAAATTGTC
TTTTTACTTG CCACTCCCGA AGCCATGTTA GCCGAGCATT TAAAGCTGCT TGGGCGCATT
ACTCGTCTTG CAGGGCGCGA AGAGGTACGC CACAAGCTTT TGCAGCTTCG TACCCCAGCC
GAGGTTATTG CGCTTTTTAA GGAGGAGGAG AAAGATTTTC CTGAGATTTA A
|
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| Protein sequence | MKIESLLSES YVALNLELVQ KSQVIATMLS IVERHPAVSD NVKLRADVLK REQEMSTGIG
KSLALPHAKS AAVSQPVIAF ATLKKALDFD SIDGEPVQIV FLLATPEAML AEHLKLLGRI
TRLAGREEVR HKLLQLRTPA EVIALFKEEE KDFPEI
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