| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1462 |
|---|
| Symbol | infB |
|---|
| ID | 3746431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1926690 |
|---|
| End bp | 1929758 |
|---|
| Gene Length | 3069 bp |
|---|
| Protein Length | 1022 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637773996 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_379761 |
|---|
| Protein GI | 78189423 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.887341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTG GGGAGTCAGA AAAAAGATAC CGCATCAGTG ATATTGCAAG AGAGCTGCAA
CTAAGCCCTC AGGAGGTGTT GCAGTTTGTC AAACAGCAAG GTGTCAAGGT GGCATCTACC
TCCTCTATGG TGAATGAAGA GGTGCATGGG CTGATTATCA ACCAGTTTAG TGCTGAAAAG
AAAATGGTTG ATGAAACCCT TAAAATTCGT GCTGAAAAAG AAAAACGCTT GACGCGTCTT
GAAGAGCAGT CGCGCAAAAC GCTTGAAAAG GAGCAGCACT TAATGGAGGC TATTTCTCCA
ACCGTGCGCG CCTCAAAAAG TAGCGCAAAA GGCTCTGAGA GTGCTCCAAA AAGTGAACCG
AAAAAAAGTA AGCAAGCGGT ACCAGCGGCT GCAATGGTTG ACGATGTGCC CGCAGCGGTG
GTGCAGCAAG TTGTTGCTGA ACCTGAAGTT GTGGAGCCAA CGCCCGTTGT TGAGGTTGAA
GCGCCTGCGC TTGAGCCTGC AATAATTTCG GAGCATGTTG TTGATGCCGA ACCAATCGAA
AATGCAGTAA CCGTTGCACC TGTTGAGGTT GTTGTTAATG AGCCTATTGA AACTGTTGAA
TCTGTTGAGC CTGAGTTCGT TGTAGCTGAA GTAACGCCAT TGGAGCCAAT AGCTCAATCC
ACCATTGAGA TTGTAGCTGA AGGAGAATCC GTTGAGGTTG CTGAAGCGCT ACATGTTGCT
GAACCAGTTG TTGCAATACC TCCAATTACC GAAACAGCAG AGCTTTCTGA TTCTACCGTT
GAGCCTATAG AGCCTATCGC TTCAGTTCCT TCTACCGCAC CAGCCCCTCC TGCACGTCGC
GAACCTACGG TTAATGAAAA TCTTGTATCG TTTGCAGCTC CGCAAATGAT GGGTGGTTTA
ACCGTTGTGG GTACGCTTGA TATGCACACA GGGCGTGGAC GTAAAAACCG CAAAAAGAAC
TTTCGTGAGC AAGCTGATGC GCTTAAGGGC GAGTTTGAGG TAAAGGCAGC CGCGCCGGTA
GCTTCCGAAA ACAAAACTGA AGCGGGCGTT GCGAAAAAAA GCAAGCCAGC GGCTGAAGTG
AAACCCAAAC CAGCCACTAC GACGGCAGCC GACGATGCCA AAAAGGCGAA AAAGGGCAAA
AAGAAGAAGA AGCCCGATGT TGACGAAAAA GTTATTTCGG CAAACATTCA AAAAACCATT
AGTGGTATTG ACGACCGTAG CGGTACGGGT TCTCGCCAAA AGTTCCGCAA AATGCGCCGC
TCTGAGCGCG AGCGTGAACA AGAAGAGGGT GCCGCACAGC GTGAGTTAGA ACAAAGCATT
GTGCGCGTTA CCGAATTTGC ATCGCCGCAC GAGCTTGCCG AATTAATGGG CATTACCGCT
AAAGATATTA TTCAGAAGTG CTTTGGACTT GGTAAGTTTG TTACCATTAA CCAGCGCCTT
GATCGTGAAT CTATTGAGCT GATTGCGCTT GAGTTTGGTT TTGAGGCTGA ATTTATTTCG
GAGGTTGAAG CAACGGCGGT TGAAACGGAA GCTGATGCTG AAGAGGATCT GCAAACCCGT
CCACCAGTGG TTACCATTAT GGGACACGTT GACCACGGTA AAACCTCATT GCTCGACTAC
ATTCGCAAAA GTCGGGTGGT TGCTGGTGAA TCGGGTGGTA TTACGCAACA CATTGGCGCT
TATGAAGTTA CCGTAGATGG CGATCGTAAA ATTACCTTTC TCGACACACC GGGTCACGAA
GCCTTTACGG CTATGCGTGC TCGTGGTGCG CAAGTAACCG ATATTGTTAT TCTGGTGGTT
GCGGCGGACG ATAACGTGAT GCCTCAAACC ATTGAAGCCA TTAACCATGC GAAAGCCGCA
GGTGTGCCTA TTGTGGTAGC GCTTAACAAA ATTGATAAAT CTGAAGCCAA CCCCGATAAA
ATTAAAACAC AACTTTCAGA AGCTGGGGTT TTAATCGAAG AGTGGGGTGG AGTTTATCAG
TGTCAAGAAA TTTCAGCTAA AAAAGGTATT GGCATTGTTG AATTGATGGA GAAAGTGCTT
ACCGAAGCTG AATTGCGTGA ACTCAAAGGC AACTACTCGC GTGAGGTTTT AGCGAGTGGC
GTTATTGTTG AGTCGGAGCT TGATAAAGGC AAGGGTGTGG TTTCAACGGT GTTGGTGCAA
CGCGGTGTGC TTAAAGTGGG CGATCCATTT GTAGCTGGCA ACAGCTTAGG TAAAGTTCGT
GCCTTAATGG ATGAGCGTGG CAAGCGCATT CTGCTCGCAT TTCCATCCCA ACCAGTACGA
GTGCTTGGCT TTGAAGATTT ACCACAATCG GGTGATGTGC TGACGGTAAT GGCAAGTGAG
CGCGATGCCC GTGATTTAGC GCAAAAACGG CAGATTATTC GCCGCGAGCA CGACTTCCGC
CGTAGCACGC GCGTTAAGCT TGATAGCATT GCACGCCAAA TTCGCGAAGG CGTTATGAAG
GAGCTGAATG TTATTATTAA AGCTGATACC GATGGCTCTA TTCAGGCGTT GGCGGATGGC
TTAATGAAGA TTCAGAACGA TGAGGTTAAA GTACAGCTTA TCCACCAAGG TGTTGGTCAA
ATTACCGAAA CCGACGTCTT GCTTGCGGCT GCATCTGATG CCATTATTAT TGGCTTCCGA
GTTCGTCCAA ACGTTAATGC TAAAAAGCTT GCTGAAAAAG AGGATCTCGA TATTCGCTTC
TACAGCGTTA TTTACCATGT GCTTGAAGAT GTAGAAACGG CGCTTGAAGG TATGCTTTCG
CCCGAATTGC ATGAAGAGAG CCTTGGTTCT ATTGAAATTC GCCAAATTTT CCGTGTACCA
AAAGTTGGTA ACGTTGGCGG TTGCTATGTG CTTGAAGGGA AAGTGCCGCG CGATGCTAAG
GTTCGCTTAT TGCGTGATGG CGTACAAATT TACGAAGGGC AACTTGCCGC ACTCAAGCGC
TTTAAGGATG ATGTAAAAGA GGTTGATTCG GGCTACGAAT GTGGTTTAAG CTTAAAGAAC
TACGACGATA TTAAAGTTGG TGATGTTGTT GAAGCGTACC GCATTGTTGA GAAAAAACGC
AAACTCTAA
|
|---|
| Protein sequence | MTLGESEKRY RISDIARELQ LSPQEVLQFV KQQGVKVAST SSMVNEEVHG LIINQFSAEK
KMVDETLKIR AEKEKRLTRL EEQSRKTLEK EQHLMEAISP TVRASKSSAK GSESAPKSEP
KKSKQAVPAA AMVDDVPAAV VQQVVAEPEV VEPTPVVEVE APALEPAIIS EHVVDAEPIE
NAVTVAPVEV VVNEPIETVE SVEPEFVVAE VTPLEPIAQS TIEIVAEGES VEVAEALHVA
EPVVAIPPIT ETAELSDSTV EPIEPIASVP STAPAPPARR EPTVNENLVS FAAPQMMGGL
TVVGTLDMHT GRGRKNRKKN FREQADALKG EFEVKAAAPV ASENKTEAGV AKKSKPAAEV
KPKPATTTAA DDAKKAKKGK KKKKPDVDEK VISANIQKTI SGIDDRSGTG SRQKFRKMRR
SEREREQEEG AAQRELEQSI VRVTEFASPH ELAELMGITA KDIIQKCFGL GKFVTINQRL
DRESIELIAL EFGFEAEFIS EVEATAVETE ADAEEDLQTR PPVVTIMGHV DHGKTSLLDY
IRKSRVVAGE SGGITQHIGA YEVTVDGDRK ITFLDTPGHE AFTAMRARGA QVTDIVILVV
AADDNVMPQT IEAINHAKAA GVPIVVALNK IDKSEANPDK IKTQLSEAGV LIEEWGGVYQ
CQEISAKKGI GIVELMEKVL TEAELRELKG NYSREVLASG VIVESELDKG KGVVSTVLVQ
RGVLKVGDPF VAGNSLGKVR ALMDERGKRI LLAFPSQPVR VLGFEDLPQS GDVLTVMASE
RDARDLAQKR QIIRREHDFR RSTRVKLDSI ARQIREGVMK ELNVIIKADT DGSIQALADG
LMKIQNDEVK VQLIHQGVGQ ITETDVLLAA ASDAIIIGFR VRPNVNAKKL AEKEDLDIRF
YSVIYHVLED VETALEGMLS PELHEESLGS IEIRQIFRVP KVGNVGGCYV LEGKVPRDAK
VRLLRDGVQI YEGQLAALKR FKDDVKEVDS GYECGLSLKN YDDIKVGDVV EAYRIVEKKR
KL
|
|---|
| |