| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1453 |
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| Symbol | |
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| ID | 3746651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1919771 |
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| End bp | 1921690 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637773987 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_379752 |
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| Protein GI | 78189414 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.899031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATG CAACCGAGTA TCAAGAAAAC CTGCGCGAAG CCGAGCGTTT TTTTCATTAC
AACAAGCACG GTTTTTTGTT TGCAGTTTCA AACGATGAAT TAGTGCAGCG CAACCTCAAT
AGCTCACTTC AGCAGCTTTT ACGTGGTAAA GGCAAAACCT TGCTTACCTA TACGTGGGAT
ACTAACCCCG AAGCGTTGCA TCCAGTTAAG CAACTGCGTC AGTTTCAACA AAACCATCTC
GAGCTTAACG GGCTTATTCT TAATGGACTT GAGCCTGCGC TTGAACACAA TCCAAACTTT
TTAGTACAAC TCAATTTTGG GCGCGAAGGG CTTGCAGAGC TTCGGATTCC CCTGCTTTTT
TGGGTAAGCA ACCGCACGTT GCAACGCGTT AATCGAGAGG CGCTTGATTT ATACAACCAA
CGCGTTAGCG CTAACCTTTA TTTTGAGCAC GACCCAACGT TGCAGCAAAG CGATAATTCT
GCTCTGCGTT ATATAGCGCA AGAAACCGTG CGAGCAAATA AAAGCCTTGC GGGTGTTGAA
GAACGTATGA AGCTTTTACA ACAGCAACTT GATGAAGCTG AAAAGCAACA CGTAGAGCCT
AAAACTATTG CAAATGAAAT TGTACTTGAA CTGCTTGAAT TGTATAGTCA AATTCTTGGT
GCAGAGCCGC TTATCCATAC GCTTCTTAAC AAATATGAAG CCTTCATTGA TAGAGAAAAT
CCTGAAAACT GCTTTAAGCT TGCTCGTGTT TTGTATGAAA TAGGAATGCG AACAGAAGCA
ATGGATTTAT ATCAAAAAGC ATTACAAACG TTGCGAGAGT TAGCTGTTAG AAATCCTGAT
ATCTATTTGC CTCATGTTGC TACAACGCTT AACAATTTGG GTGCTTTGCA ATATACGACA
AACGATTACA CTGCTGCGTT AGCAAGCTTC ACTGAAGCGC TTACGATACG TCGTGAGTTA
GCCGCTAAAA ATCCCGATGT TTATTTGCCT GATGTAGCAG ACACGCTTAA CAACTTGGGT
GCTTTGCAAT CAGATATGAA CGATTACGCC GCGGCGTTAG CAAGCTTCAC TGAAGCGCTT
ACGCTGTATC GTGAGTTAGC TGTTAAAAAT CCCGATGTTT ATTTGCTTTA TGTAGCTGGT
ACGCTTAATA ATCTGGGAAT TTTGCAATAC AATACGAACG ATTACGCTGC TGCCTTAGCA
AGCTATAACG AAGCGCTTAC GCTATATCGT GAGTTAGCGG CAAAAAATCC CGATGTTTAT
TTGCCTGATG TTGCAACAAC GCTTTACAAT CTGGGGAATT TGCAATACAA TACGAACGAT
TACGCTGCTG CCTTAGCAAG CTATAACGAA GCGCTTACGC TATATCGTGA GTTAGCTACT
AAAAATCCCG ATGTCTATTT GCCTGATGTC GCCATGACGC TTAGCAATCT TGGAAATTTG
CAATACACGA CAAATGATTA CGCCGCTGCG TTAGCAAGCT ATACTGAAGC ATTAACAATA
CGTCGTGAGT TAGCTGTTAA AAATCCTGAT GTTTATTTGC CTGATGTAGC TACAACGCTT
AACAATCTGG GTGCGTTGCA ATCAGAGACT AACGATTACG CCGCTGCGTT AACAAGCTTC
ACTGAAGCGC TTACGCTATA TCGTGAGTTC GCAACTAAAA ATCCCGATGT GTATTTGCCT
TATGTAGCAG GATCGCTGAT AAACATGGCA GTCTGGTATT ACAAAGCACC GCAAGCAAAT
CAACAACAAT CGTTAGCGTT TGTTACAGAA GCACTGCACA TAGCGTTGTC GTTAGTTGAA
AAAATACCTA ATGTGCAACT CAATATTGAT TCTGCATACA ACTTATTACG TGCGTGGGGT
ATTGAACCAG AGGAGTTTGT AAAGCAGGTG GGAACATCGG GTGCATCAGG CGGCGAATAA
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| Protein sequence | MSDATEYQEN LREAERFFHY NKHGFLFAVS NDELVQRNLN SSLQQLLRGK GKTLLTYTWD
TNPEALHPVK QLRQFQQNHL ELNGLILNGL EPALEHNPNF LVQLNFGREG LAELRIPLLF
WVSNRTLQRV NREALDLYNQ RVSANLYFEH DPTLQQSDNS ALRYIAQETV RANKSLAGVE
ERMKLLQQQL DEAEKQHVEP KTIANEIVLE LLELYSQILG AEPLIHTLLN KYEAFIDREN
PENCFKLARV LYEIGMRTEA MDLYQKALQT LRELAVRNPD IYLPHVATTL NNLGALQYTT
NDYTAALASF TEALTIRREL AAKNPDVYLP DVADTLNNLG ALQSDMNDYA AALASFTEAL
TLYRELAVKN PDVYLLYVAG TLNNLGILQY NTNDYAAALA SYNEALTLYR ELAAKNPDVY
LPDVATTLYN LGNLQYNTND YAAALASYNE ALTLYRELAT KNPDVYLPDV AMTLSNLGNL
QYTTNDYAAA LASYTEALTI RRELAVKNPD VYLPDVATTL NNLGALQSET NDYAAALTSF
TEALTLYREF ATKNPDVYLP YVAGSLINMA VWYYKAPQAN QQQSLAFVTE ALHIALSLVE
KIPNVQLNID SAYNLLRAWG IEPEEFVKQV GTSGASGGE
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