Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1407 |
Symbol | |
ID | 3747166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1872134 |
End bp | 1874296 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637773943 |
Product | M50 family peptidase |
Protein accession | YP_379708 |
Protein GI | 78189370 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGCG AAGGCACAAC CTATAGCGAG TCGTGGCACC TTGTTGCCAA CCTCCATCTT AAATTGCGTT CCACCGTTGA GGTGCAACGC CAATTTTACA GAGGTGAAAA GTGGTATGTG TTAAAGGAAC CCTTTACCAA CCGCTTTTTT CGCCTTCAGC CGGCGGCGTA TGAATTTATT ATGCGCCTTT CGCCCGAGCA GAGCGTTGAA GAGGTATGGT TGAACTGCTT AAAAGAGTTC CCCGATCAAG CTCCGGGGCA GGGCGATGTA GTAAGTATGC TGGGGCAGCT TTATGCCATG AATTTGCTTG AAACCGATGT ATCGCCCGAT ACACGGCAAA TGTTTGCCCG TTACAGCCAA AACCGTCGTA AAGAGAAGTT TGCGCAACTG CTCAACATTC TCTTTATCCG CTTACCGCTC TTTGACCCCG AACCTCTGTT GCAACGGTTG TCGTGGGTTA TCCATCGCGT TATTAGCATA CCCGGGGCAA TTGTGTGGTT TACGGCACTG CTGGTAGCCG CCAAGCTGCT TACCGATAAT TCGGCTGGCG TGTTTGATAG TGCGCAAGGC GTGCTGGCGC CCGGTAACCT TTTTCTGCTC TACATTGCCT TAGTTTTTGT AAAGTCGGTG CATGAATTTG GTCATGCCAC TGTGTGCCAT CGCTTTGGAG GTGAAGTGCA CACCATGGGC GTTATGTTTA TGATTTTTAC GCCGCTGCCT TACATGGATG CCACTTCAAG TTGGGGATTC CGCAGCCGTT GGGAGCGAGC ACTTGTGGGT GCCGCAGGCA TGATTTCGGA GCTTTTTATT GCAGCTTTTG CGGCTATTTA TTGGGCACTA TCAGGCGAAG GAGCACTCCA TTCATTAGCC TACAACGTGA TGTTTGTGGC ATCCATCTCC ACCTTGCTCT TTAACATCAA TCCCTTGCTC CGCCTTGATG GCTACTACAT TCTCTCCGAC CTGATTGATA TTCCCAACCT CCATAACCGC GCTGTTGAAC ACCTTAAATA TCTGCTTGAG CGCTACGTTT TTCACTACAG CGGAGCTACG CCTGTAGCTA AAAATCGTCG TGAGGAAATT GAACTCACCC TTTACGGCGT TTTAAGCTCC ATTTATAAAG TGGTGATTTT TTTGGGTATC ACCTTATTTG TTGCCGATAA ATGGCTCATT CTTGGTACAC TGCTTGCTAT TACAGGTGTG GTAACAGGCT TTTTTCTCCC CCTTTATCGT TTTGTACGCT ACCTCTTTTT TGATGCACGC CTCTACTCAT GCCGCCCTCG TGTAGCCAGC GCAACCGCAC TCTTCCTCTT GATTTTTTTA GTGGTAACAG GGTTACTGCC ATTTCCACGC AATGTGTCGG CACCCGGAAT TGTGGAATCG TACCCCGACG TTAAGGTGGT GAATTTAAGT GCAGGCTCAG TGGTGGAATA TCTTGTTACG CCCGGTCAGC GTGTTGTTGC AGGGCAACCA CTTGTTCGAC TTGAAAATCC TGAACTGGAT TTTGCCTTAG CAAGTGCAGA ATCGCGAGTA ACGGAAATTC GAGTACGTGA ACGCTTAGCA CTCGGCAAAC GCATTGCCGA CTTAAAACCC GTGCAGCAAG AGCTTGCGGC AGTTGAAGCC GAGTTAGCAA AATTGCAGCG CGATAAGCAA GAATTAGTGG TACGAGCACG CGCCGCAGGG CAGTGGATTC CAGCCACTCG TGAATCCATT GCAGGCATGT GGGTTGAACG TGGACGCTAT CTTGGCTCCA TTGTTGGCGG AAGCCGCTTT CGCTTTGCCG CCGTTGTGCC GCAAGAAGAG GCATCGGAAC TATTTCGTGC ACCCGTTGCG CACATTGAGG TAAAGCTGTG GGGCGAAGCC TTTCGCAGCA TTCGCACCGA ATCGGTTACG TTGGTGCCTT ATCAACACGA AAAATTGCCC TCCGCCGCAC TTGGGCAACA AGCAGGCGGC AGCGTAGCCG TTGTGCAAAA TTCTCGCCAA GAAGCAGATA ATGCCGCAGA ACCATTTTTC TTGATAAATG CTTTGCTTGA AGAGCAATCG GGCGTCCATT TGTTGCATGG ACGTTCAGGC ACCATTCGCA TGAGCTTATC GCCCGAACCA CTTTTAGTGC AATGGAGTCG CCGCATTTAT CAGCTTTTCC AAAAGCGCTA TCAAGTATCG TGA
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Protein sequence | MAGEGTTYSE SWHLVANLHL KLRSTVEVQR QFYRGEKWYV LKEPFTNRFF RLQPAAYEFI MRLSPEQSVE EVWLNCLKEF PDQAPGQGDV VSMLGQLYAM NLLETDVSPD TRQMFARYSQ NRRKEKFAQL LNILFIRLPL FDPEPLLQRL SWVIHRVISI PGAIVWFTAL LVAAKLLTDN SAGVFDSAQG VLAPGNLFLL YIALVFVKSV HEFGHATVCH RFGGEVHTMG VMFMIFTPLP YMDATSSWGF RSRWERALVG AAGMISELFI AAFAAIYWAL SGEGALHSLA YNVMFVASIS TLLFNINPLL RLDGYYILSD LIDIPNLHNR AVEHLKYLLE RYVFHYSGAT PVAKNRREEI ELTLYGVLSS IYKVVIFLGI TLFVADKWLI LGTLLAITGV VTGFFLPLYR FVRYLFFDAR LYSCRPRVAS ATALFLLIFL VVTGLLPFPR NVSAPGIVES YPDVKVVNLS AGSVVEYLVT PGQRVVAGQP LVRLENPELD FALASAESRV TEIRVRERLA LGKRIADLKP VQQELAAVEA ELAKLQRDKQ ELVVRARAAG QWIPATRESI AGMWVERGRY LGSIVGGSRF RFAAVVPQEE ASELFRAPVA HIEVKLWGEA FRSIRTESVT LVPYQHEKLP SAALGQQAGG SVAVVQNSRQ EADNAAEPFF LINALLEEQS GVHLLHGRSG TIRMSLSPEP LLVQWSRRIY QLFQKRYQVS
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