Gene Cag_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1407 
Symbol 
ID3747166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1872134 
End bp1874296 
Gene Length2163 bp 
Protein Length720 aa 
Translation table11 
GC content50% 
IMG OID637773943 
ProductM50 family peptidase 
Protein accessionYP_379708 
Protein GI78189370 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCG AAGGCACAAC CTATAGCGAG TCGTGGCACC TTGTTGCCAA CCTCCATCTT 
AAATTGCGTT CCACCGTTGA GGTGCAACGC CAATTTTACA GAGGTGAAAA GTGGTATGTG
TTAAAGGAAC CCTTTACCAA CCGCTTTTTT CGCCTTCAGC CGGCGGCGTA TGAATTTATT
ATGCGCCTTT CGCCCGAGCA GAGCGTTGAA GAGGTATGGT TGAACTGCTT AAAAGAGTTC
CCCGATCAAG CTCCGGGGCA GGGCGATGTA GTAAGTATGC TGGGGCAGCT TTATGCCATG
AATTTGCTTG AAACCGATGT ATCGCCCGAT ACACGGCAAA TGTTTGCCCG TTACAGCCAA
AACCGTCGTA AAGAGAAGTT TGCGCAACTG CTCAACATTC TCTTTATCCG CTTACCGCTC
TTTGACCCCG AACCTCTGTT GCAACGGTTG TCGTGGGTTA TCCATCGCGT TATTAGCATA
CCCGGGGCAA TTGTGTGGTT TACGGCACTG CTGGTAGCCG CCAAGCTGCT TACCGATAAT
TCGGCTGGCG TGTTTGATAG TGCGCAAGGC GTGCTGGCGC CCGGTAACCT TTTTCTGCTC
TACATTGCCT TAGTTTTTGT AAAGTCGGTG CATGAATTTG GTCATGCCAC TGTGTGCCAT
CGCTTTGGAG GTGAAGTGCA CACCATGGGC GTTATGTTTA TGATTTTTAC GCCGCTGCCT
TACATGGATG CCACTTCAAG TTGGGGATTC CGCAGCCGTT GGGAGCGAGC ACTTGTGGGT
GCCGCAGGCA TGATTTCGGA GCTTTTTATT GCAGCTTTTG CGGCTATTTA TTGGGCACTA
TCAGGCGAAG GAGCACTCCA TTCATTAGCC TACAACGTGA TGTTTGTGGC ATCCATCTCC
ACCTTGCTCT TTAACATCAA TCCCTTGCTC CGCCTTGATG GCTACTACAT TCTCTCCGAC
CTGATTGATA TTCCCAACCT CCATAACCGC GCTGTTGAAC ACCTTAAATA TCTGCTTGAG
CGCTACGTTT TTCACTACAG CGGAGCTACG CCTGTAGCTA AAAATCGTCG TGAGGAAATT
GAACTCACCC TTTACGGCGT TTTAAGCTCC ATTTATAAAG TGGTGATTTT TTTGGGTATC
ACCTTATTTG TTGCCGATAA ATGGCTCATT CTTGGTACAC TGCTTGCTAT TACAGGTGTG
GTAACAGGCT TTTTTCTCCC CCTTTATCGT TTTGTACGCT ACCTCTTTTT TGATGCACGC
CTCTACTCAT GCCGCCCTCG TGTAGCCAGC GCAACCGCAC TCTTCCTCTT GATTTTTTTA
GTGGTAACAG GGTTACTGCC ATTTCCACGC AATGTGTCGG CACCCGGAAT TGTGGAATCG
TACCCCGACG TTAAGGTGGT GAATTTAAGT GCAGGCTCAG TGGTGGAATA TCTTGTTACG
CCCGGTCAGC GTGTTGTTGC AGGGCAACCA CTTGTTCGAC TTGAAAATCC TGAACTGGAT
TTTGCCTTAG CAAGTGCAGA ATCGCGAGTA ACGGAAATTC GAGTACGTGA ACGCTTAGCA
CTCGGCAAAC GCATTGCCGA CTTAAAACCC GTGCAGCAAG AGCTTGCGGC AGTTGAAGCC
GAGTTAGCAA AATTGCAGCG CGATAAGCAA GAATTAGTGG TACGAGCACG CGCCGCAGGG
CAGTGGATTC CAGCCACTCG TGAATCCATT GCAGGCATGT GGGTTGAACG TGGACGCTAT
CTTGGCTCCA TTGTTGGCGG AAGCCGCTTT CGCTTTGCCG CCGTTGTGCC GCAAGAAGAG
GCATCGGAAC TATTTCGTGC ACCCGTTGCG CACATTGAGG TAAAGCTGTG GGGCGAAGCC
TTTCGCAGCA TTCGCACCGA ATCGGTTACG TTGGTGCCTT ATCAACACGA AAAATTGCCC
TCCGCCGCAC TTGGGCAACA AGCAGGCGGC AGCGTAGCCG TTGTGCAAAA TTCTCGCCAA
GAAGCAGATA ATGCCGCAGA ACCATTTTTC TTGATAAATG CTTTGCTTGA AGAGCAATCG
GGCGTCCATT TGTTGCATGG ACGTTCAGGC ACCATTCGCA TGAGCTTATC GCCCGAACCA
CTTTTAGTGC AATGGAGTCG CCGCATTTAT CAGCTTTTCC AAAAGCGCTA TCAAGTATCG
TGA
 
Protein sequence
MAGEGTTYSE SWHLVANLHL KLRSTVEVQR QFYRGEKWYV LKEPFTNRFF RLQPAAYEFI 
MRLSPEQSVE EVWLNCLKEF PDQAPGQGDV VSMLGQLYAM NLLETDVSPD TRQMFARYSQ
NRRKEKFAQL LNILFIRLPL FDPEPLLQRL SWVIHRVISI PGAIVWFTAL LVAAKLLTDN
SAGVFDSAQG VLAPGNLFLL YIALVFVKSV HEFGHATVCH RFGGEVHTMG VMFMIFTPLP
YMDATSSWGF RSRWERALVG AAGMISELFI AAFAAIYWAL SGEGALHSLA YNVMFVASIS
TLLFNINPLL RLDGYYILSD LIDIPNLHNR AVEHLKYLLE RYVFHYSGAT PVAKNRREEI
ELTLYGVLSS IYKVVIFLGI TLFVADKWLI LGTLLAITGV VTGFFLPLYR FVRYLFFDAR
LYSCRPRVAS ATALFLLIFL VVTGLLPFPR NVSAPGIVES YPDVKVVNLS AGSVVEYLVT
PGQRVVAGQP LVRLENPELD FALASAESRV TEIRVRERLA LGKRIADLKP VQQELAAVEA
ELAKLQRDKQ ELVVRARAAG QWIPATRESI AGMWVERGRY LGSIVGGSRF RFAAVVPQEE
ASELFRAPVA HIEVKLWGEA FRSIRTESVT LVPYQHEKLP SAALGQQAGG SVAVVQNSRQ
EADNAAEPFF LINALLEEQS GVHLLHGRSG TIRMSLSPEP LLVQWSRRIY QLFQKRYQVS