| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1394 |
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| Symbol | |
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| ID | 3746578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1856960 |
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| End bp | 1857895 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637773930 |
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| Product | tRNA isopentenyltransferase |
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| Protein accession | YP_379695 |
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| Protein GI | 78189357 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00983803 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACCT CTGCAATGCA CCATCCACCC ATTGTAGTGC TTGCTGGTGC CACAGCATCA
GGCAAATCGG CATTAGCTAT GGCAATAGCA AAAAAAATTG GTGCGGAAAT CATCTCCGCC
GACTCGCGCC AAATTTATTG GGAACTCACT ATTGGTGCCG CCAAGCCATC TCCTAAAGAG
TTGCAAGAGG TGCCACATCA TTTCATTAAT GAAAAACATA TTGGCGAACC CTTTACAGCG
GGCGACTTTG CCGTTGAAGC ATGGCAGCGC ATTACTGCCA TTCATCAGCG CGATAAACGA
GTGGTGGTTG CTGGCGGCTC AACCCTTTAT GTGGAGGGAT TGCTGAAAGG CTTTGCCAAC
CTCCCCAGTG CAAACGAAGC CATTCGCCAA CGCCTTGAAA CGGAGCTGCA AACGCTTGGA
AGTGAAGCAC TCTATCAGCG CTTAGTGAAG CTTGACCCCA CGCAAGCCGC TACGCTTGAT
GCTACAAAAA CTCAACGCCT TATTCGTAGC CTTGAAATTA TTGAAAGTAG TGGCACAAGC
GTTACTGCCC TTAAAGCCGC CCAGCAGCCT CCGCCAAGCC ACTTCACCTT TCTACCGTTT
GCGCTTTTTC TGCCTCGCGA AACATTGTAC CAACGCATTA ACCAGCGTGT TGATGACATG
ATGGCAAACG GCTTACTGCA TGAAGCGGAG GCACTCTACC AAACCTATTG CGACACATGG
CAAGAGCGCA ACCTTTCTGC CCTGCGCACG GTAGGCTATC AAGAACTCTT TGCCTATTTT
GAAGGCAGGC ACTCGCTTGA CGAAGCCATC AACCTCATTA AGCAACACAC CCGCAACTAC
GCAAAACGGC AAATCACCTT TTTCAGCAAC CACCTTGCAC TCCGTTGGAT TGAGCAAGCG
GAAATGGAAG AAATAGTTGA ACAACATGGT TTTTAA
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| Protein sequence | MATSAMHHPP IVVLAGATAS GKSALAMAIA KKIGAEIISA DSRQIYWELT IGAAKPSPKE
LQEVPHHFIN EKHIGEPFTA GDFAVEAWQR ITAIHQRDKR VVVAGGSTLY VEGLLKGFAN
LPSANEAIRQ RLETELQTLG SEALYQRLVK LDPTQAATLD ATKTQRLIRS LEIIESSGTS
VTALKAAQQP PPSHFTFLPF ALFLPRETLY QRINQRVDDM MANGLLHEAE ALYQTYCDTW
QERNLSALRT VGYQELFAYF EGRHSLDEAI NLIKQHTRNY AKRQITFFSN HLALRWIEQA
EMEEIVEQHG F
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