| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1350 |
|---|
| Symbol | |
|---|
| ID | 3746865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1816996 |
|---|
| End bp | 1817685 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637773888 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379653 |
|---|
| Protein GI | 78189315 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCA TTGCATCCAA TCTTGCTGCT ATTCACGCAC AAGTTGCAGC CGCATGTAAA
CAAGCTGGGC GAAAGCCTGA AAGCGTGCGG CTTATTGCTG TTTCTAAAAC AAAGTCGGCG
GAATTGGTGC GCGAAGCCTT TGACGCGGGG CAACTTGAGT TTGGCGAAAG CTACATGCAA
GAGTTTCTCG AAAAATATGA ATCACGAGCG TTGCAAGGTT GCCCGATTCA ATGGCATTTT
ATTGGGCATC TGCAATCCAA CAAAGTTCGC TCGCTTGTAG GCAAGGTGAG CTTAATTCAC
GGTATTGATA AGCTTTCAAC CGCCGAAGAG CTTTCCAAAC GTGCGGTGCA GCAAAATCTA
ACGGTAGATT ATCTCCTTGA GGTCAACACC TCAGGCGAAG CCTCAAAGTA TGGCATGGCA
CCACATACCG TGCTTTCTGA AGCCTCAGCG TTTTTTGCGT TACCGAACGT CCGTTTACGC
GGCTTAATGA CCATTGCCAC CTATGAGCGC GAAGCTGCAC GACGTGAGTT CCAAGAGTTG
CGTGAATTGC TGGAACAATT GCAAGCTATT GCCCCTGACC CAACGCTTGT AACCGAGCTT
TCAATGGGCA TGAGCGGCGA TTTTGAAGAG GCAATTCAAG AAGGAGCCAC CATGATTCGT
GTTGGCTCAG CAATTTTTGG TTGGCGTTAA
|
|---|
| Protein sequence | MESIASNLAA IHAQVAAACK QAGRKPESVR LIAVSKTKSA ELVREAFDAG QLEFGESYMQ
EFLEKYESRA LQGCPIQWHF IGHLQSNKVR SLVGKVSLIH GIDKLSTAEE LSKRAVQQNL
TVDYLLEVNT SGEASKYGMA PHTVLSEASA FFALPNVRLR GLMTIATYER EAARREFQEL
RELLEQLQAI APDPTLVTEL SMGMSGDFEE AIQEGATMIR VGSAIFGWR
|
|---|
| |