Gene Cag_1348 details

Gene Information

• Locus tag: Cag_1348
• ID: 3746863
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 1815781
• End bp: 1816446
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637773886
• Product: TPR repeat-containing protein
• Protein accession: YP_379651
• Protein GI: 78189313

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAAA CCGCTAAACC TTCCGCCGAA GAGCAACTGC TCTATATTGT TATTAAGTAT 
AAAAAAGCGC TAATTGGCGC TTTAGTTGTA ATTGTAACGC TTGGAGCGGG CGCTTTTTTT 
GGGACACGCT ACCAAGAGCA ACGCGAACAA GAAGCTGCAT TGCAACTCTC CCGTGTTTCC 
CCCGCTCTTG AGCAAGGCAA CTTTACCCTT GCCATTAATG GCACAAAGCA AACCGCAGGA 
TTACAAAAAA TTGCCAATGA GTACAGCGGT AGATTTATTG GCACGCCCAG CGGCAACATG 
GCAAAGCTCT TGCTTGCAAA CGCATGGTAC TCGTTTGGCA AATACGAAAC GGCTTTGCAG 
CACTTTAATG AAGTAACCAT CGCACATGAG GATTTAGCCG CTGCCGCACT TGCAGGTTCG 
GGTGATTGTT ACCTTAATCT TAATAAATTA AAAGAGGCGG CTGAAGCATA TCAAAAAGCG 
GCAAACAAAA CCGATAACCG CATTTTAAAA GCGCAATACC TCACCCACGA AGCTACGGCG 
TACCACTACG CAAAAGATTT TCCTAAAGCG ACCGAGCTTT ATAAAACGGT GATTGCAAGT 
TATCCGGGCA CAACTGCCGC ATCAATTGCT CAGCACGGAT TGTGGCAACT TTCAGGCTCC 
CTTTAA 

 

Protein sequence

MEQTAKPSAE EQLLYIVIKY KKALIGALVV IVTLGAGAFF GTRYQEQREQ EAALQLSRVS 
PALEQGNFTL AINGTKQTAG LQKIANEYSG RFIGTPSGNM AKLLLANAWY SFGKYETALQ 
HFNEVTIAHE DLAAAALAGS GDCYLNLNKL KEAAEAYQKA ANKTDNRILK AQYLTHEATA 
YHYAKDFPKA TELYKTVIAS YPGTTAASIA QHGLWQLSGS L