Gene Cag_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1346 
Symbol 
ID3746861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1814035 
End bp1814526 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content45% 
IMG OID637773884 
Productlipoprotein signal peptidase 
Protein accessionYP_379649 
Protein GI78189311 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCT TTTTCTCGCT CGCATTATTT GTTGTTGCGG CTGATCAATT CTCAAAATAT 
GTGGCGCTCC GCTTCTTGCG CGATGCCAAT CAAAGCATCT CCATTATTCC CAACTTTTTT
TCTTTTACCT ATGCTGAAAA CCGAGGCATA GCCTTTGGCT TGGAACCTGC CCCACCAGCG
CTTTTGCTGC TCTTCACGAT GATGATATCA GCCGCAGTGC TCTGGTATGT GTTACGCTCC
AATAATAGGA GGTTGATTTT TTTACTTCCT TTTAGCTTAA TTCTTGGGGG TGGCGTTGGC
AATATGATTG ACCGAATGGT GCGCGGTTAT GTGGTTGATT TTATTTACTT CAACCTCTAC
AATGGCTACG TTGGCAACAT CTATCTTTCG CTGTGGCCAA TTTTTAACAT TGCCGATTCG
GCAATTACGA TTGGCGGCAC CATGCTACTG CTGTTCCACC GTACTCTTTT TCCTGATGAC
CCGATTGCTT AG
 
Protein sequence
MKLFFSLALF VVAADQFSKY VALRFLRDAN QSISIIPNFF SFTYAENRGI AFGLEPAPPA 
LLLLFTMMIS AAVLWYVLRS NNRRLIFLLP FSLILGGGVG NMIDRMVRGY VVDFIYFNLY
NGYVGNIYLS LWPIFNIADS AITIGGTMLL LFHRTLFPDD PIA