| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1344 |
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| Symbol | |
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| ID | 3746859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1811730 |
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| End bp | 1813145 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637773882 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_379647 |
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| Protein GI | 78189309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.641665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCACA TGCCTGATTT TTTCGACGAC GACCGTTTTG AGTTTTCAAG CAATAACGGA
GAGTTGCCAC CTGATCTTGA TGGACTTGAC TCCATATTTG ACTCGGAAGA GTTAGTGGAG
CGCATTATGC AATACATGGA GGATGGCTTT CCGCTTGAAG CCCTTGCCGT TGCTCGCCGT
CTTGAGCAAA TTGCTCCTTA CAACAGCGAA ACATGGTTTT ACCTTGGCAA CTGCCTTACC
ATGAATGCCT TTTTTGACGA AGCCCTTGAG GCTTTCCATA AAGCATTGCT ATTGAGCCCA
ACGGATAGCG AAATGCAACT TAATTTAGCG CTTGGCTACT TTAACAACAG CATGTACGAA
GAAGCGCTTG AGCAAATTGA GCGTGTGATG GTAGATTTTG CATTTGAAAA GGAGTACCAC
TACTATCGCG GCATTATTTT GCAACGGCTT GATCGCTATG ACGAGGCTGA AAAGGCGTTC
CTTATGGCAT TGGAGCTTGA TAACGAGTTT GCGGATGCGT GGTATGAAAT TGCTTATTGC
CACGATGTAT GCGGTCGGCT CGAAGAGAGC ACTACCACCT ACAACACAGC GTTGGATCAC
GATCCGTACA ATATTAACGC ATGGTATAAT AACGGCTTAG TGCTCAGCAA AATGAAGCAC
TACGACGAAG CGCTTTTTTG CTACGACATG GCACTTGCTA TTGCCGACGA CTTTAGCTCG
GCATGGTACA ACCGCGCCAA TGTGCTTGCT ATTACAGGGC GCATTCAGGA AGCGGCTGAA
AGTTATGAGC AAACGCTGGA GTTAGAGCCT GAAGATATTA ATGCACTCTA CAATCTTGGT
ATTGCGTATG AAGAGCTTGA GCGCTACCCC GATGCTATGG AGTGTTACCG CCGCTGTATT
ACCATTGTGC CTGAATTTGG CGATGCGTGG TTTGCGCTTG CCTGCTGCCA CGAAGTACTC
GAAGAGTTTG ACGAAGCGTA CAGCGCAACA CTTGAAGCTC TGAAAACTTC AGCAGATTGT
GTAGAATTTT TATTGCTGAA AGCTGAAATT GAATACACGC TCAATAAGGC CGAAGAGTCT
ATTCATACGT ATGAAAGAAT TATTGAGCTG GAACCCGACA ATCCTCAAAT TTGGGTTGAT
TTTGCCATTG TGCTGCGCGA AGCTGGTATG GTTAATGCCT CAATTGAAGC GCTGCACTGC
TCGCTGAAAT TACAGCCAAT GTCGGCTGAT GCTCATTTTG AAATTGCCGC CGCTTACTTT
GCGCTTGGCG ATAAATTGAG CACGCTTAAA GCGCTCAGTA AAGCCTTTAA AATTGATCCC
GATAAAAAAG AGCTGTTTCA AAGCACTTTC CCTGAACTCT ATCAACAGGA TTCGGTAAGA
AGAATGTTGG GAATTCTTGA AATGCCGAAT GAATAG
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| Protein sequence | MIHMPDFFDD DRFEFSSNNG ELPPDLDGLD SIFDSEELVE RIMQYMEDGF PLEALAVARR
LEQIAPYNSE TWFYLGNCLT MNAFFDEALE AFHKALLLSP TDSEMQLNLA LGYFNNSMYE
EALEQIERVM VDFAFEKEYH YYRGIILQRL DRYDEAEKAF LMALELDNEF ADAWYEIAYC
HDVCGRLEES TTTYNTALDH DPYNINAWYN NGLVLSKMKH YDEALFCYDM ALAIADDFSS
AWYNRANVLA ITGRIQEAAE SYEQTLELEP EDINALYNLG IAYEELERYP DAMECYRRCI
TIVPEFGDAW FALACCHEVL EEFDEAYSAT LEALKTSADC VEFLLLKAEI EYTLNKAEES
IHTYERIIEL EPDNPQIWVD FAIVLREAGM VNASIEALHC SLKLQPMSAD AHFEIAAAYF
ALGDKLSTLK ALSKAFKIDP DKKELFQSTF PELYQQDSVR RMLGILEMPN E
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