Gene Cag_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1300 
Symbol 
ID3747448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1766153 
End bp1766713 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID637773837 
Producthypothetical protein 
Protein accessionYP_379603 
Protein GI78189265 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCAGG TTTCCCGCAA ATTTGAATAT GGGCTTCACG CCATTACTTA CTTAGCAACC 
AAAGGGCAAA ACCGCGTTGT AACGGTAAAG GAGCTATCGG AAGAGTTAGG CTTTTCCCAA
GAATTTCTTT CAAAAGCAAT GCAAAGCTTA AAAAAAGCAG GCATTACAAA GTCGGTGCAA
GGGCTGCGTG GTGGTTTTCG TTTAATAAAA CCAATCACCG AAATTACCGT CGCCGATATT
GCTGTGGCTA CCGAGGGTGA ACCGCATTTA GTGCAATGCA ACATTAGCGC CGAACGCTGC
CATGTGTATG CCACATGCCA ACACAAAGCT TTTATGAATA CGTTGCAACA CAAAATTCAT
GAGCTACTTG CCACCACCAC CATTGTAGCA TTATTGGAAC AGTGCGACAT CCCTTTTACC
CCTTATACTC TTATAATAGA TACCGAAGAG ACGGAGAAGA TGGAGGATGG CGAAGAGAGC
TTAGAGGACA TGGAGAGTAG CAAACCCATC ATTCCCTTCT CTCCACTCTA TTATGCGCCA
GTAAAAACGC ACTCTAAATA A
 
Protein sequence
MLQVSRKFEY GLHAITYLAT KGQNRVVTVK ELSEELGFSQ EFLSKAMQSL KKAGITKSVQ 
GLRGGFRLIK PITEITVADI AVATEGEPHL VQCNISAERC HVYATCQHKA FMNTLQHKIH
ELLATTTIVA LLEQCDIPFT PYTLIIDTEE TEKMEDGEES LEDMESSKPI IPFSPLYYAP
VKTHSK