Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1276 |
Symbol | |
ID | 3748314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1739311 |
End bp | 1740747 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637773814 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_379580 |
Protein GI | 78189242 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0924333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACTCT CATTTGATAT CATGGTTATT GGCGGCGGAC CAGGCGGCTA TATTGCGTCA ATCCGTGCCG CACAACTTGG CATGTCGGTT GCCTGCTGCG AATACAACCC CTACGACGAT CCTGCGGGCG AACCACGCCT GGGTGGCACT TGCTTGAATG CAGGCTGCAT TCCGCTGAAA GCACTTGTTG CCTCATCCGA AGCCTATGAA CACGCAACAA CCCACTTTGC GGCACATGGC ATTAGCGTCA GCGGTTTAAG CATGGACGTT ACAAAAATGC AAAAGCGCAA GGAATCCATT GTGCGCCGCA TGACGGCTGG CATTCAATTC CTCTTTAAAA AGAATAACGT TACGCTTCTG AAAGGATGTG GCTCATTTGT AGGCAAAAGC GAGGATGGCT ATCGGCTCTT AGTGAAAGGC AAAGAAGGCG AAACTGAAGT AACGGCACGA AACGTCATTA TAGCAACAGG TTCCACGCCA CGCCATCTGC CAAACATTAC GGTGGATAAT CTCACCATTT GCGACAACGT TGGTGCGCTT AAATTGAGTG ATGTTCCAAA ACGGCTTGCC ATTATTGGAG CGGGCGTTAT TGGCTTAGAA GTGGGCTCCG TATGGCGACG ACTTGGCGCT GAAGTAACGC TGCTCGAAAT GCTCCCCACC CTTCTCCCCT TTGCCGATGA AAGCATTGCA ACCGAAGCCG CAAAGCTCTT TAAAAAGCAA GGGCTAAACA TTGTAACAGG CGTTTCAATC AGTGAAATCA AGCATGAAGC TACAGGCGTT TCAATTGCGT ATAGCGACAA AGATGGTGCC CCACAAAGCG TGGAATGCGA TAAACTCATG CTCTCCATTG GACGCACTCC CAACACCAAT GGCTTAAACC TTGAAGCTAT TGGCTTACAA CCCGATGCAC GAGGTTTTAT TCCCGTCAAC GAGCAATGCG CAACCACCAT TCACGGCATT TACGCCATTG GCGACGTGGT GCGCGGTCCT ATGCTGGCGC ACAAAGCCGA AGATGAGGGC GTTATGGTTG CCGAAGTTAT TGCGGGGCAG AATGCACACA TCAACTACAA CGCCATCCCC AGCGTTATTT ACACCTCGCC CGAAATGGCA TGGGTTGGGC AAAGTGAGCA ACAATTACGC GCAGAGGGAC GTGCTTATAA AGCAGGACAA TTTCCGTATG GAGCAAATGG AAGAGCGCAA GGGCTTGGCG CACCTGAAGG CTTTATTAAA ATGATTGCTG ATGCCGACAG CGATAAAATT CTTGCTGTGC ATTGCATTGG CGCAAGCGCT TCGGAGCTTA TTGGGGAAGC CACGTTAGCA ATGGAAATGG GGATTACTGC TGCCGAATTA GCACGCACCT GCCACGCTCA CCCAACACTT TCGGAGGTGA TGCGCGAAGC GGCGCTTGCG GTGCATGGAA GGGCGTTGAA TGTATAA
|
Protein sequence | MTLSFDIMVI GGGPGGYIAS IRAAQLGMSV ACCEYNPYDD PAGEPRLGGT CLNAGCIPLK ALVASSEAYE HATTHFAAHG ISVSGLSMDV TKMQKRKESI VRRMTAGIQF LFKKNNVTLL KGCGSFVGKS EDGYRLLVKG KEGETEVTAR NVIIATGSTP RHLPNITVDN LTICDNVGAL KLSDVPKRLA IIGAGVIGLE VGSVWRRLGA EVTLLEMLPT LLPFADESIA TEAAKLFKKQ GLNIVTGVSI SEIKHEATGV SIAYSDKDGA PQSVECDKLM LSIGRTPNTN GLNLEAIGLQ PDARGFIPVN EQCATTIHGI YAIGDVVRGP MLAHKAEDEG VMVAEVIAGQ NAHINYNAIP SVIYTSPEMA WVGQSEQQLR AEGRAYKAGQ FPYGANGRAQ GLGAPEGFIK MIADADSDKI LAVHCIGASA SELIGEATLA MEMGITAAEL ARTCHAHPTL SEVMREAALA VHGRALNV
|
| |