Gene Cag_1268 details

Gene Information

• Locus tag: Cag_1268
• Symbol: thiH
• ID: 3748306
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 1733993
• End bp: 1735063
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637773806
• Product: thiamine biosynthesis protein ThiH
• Protein accession: YP_379572
• Protein GI: 78189234
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
• TIGRFAM ID: [TIGR02351] thiazole biosynthesis protein ThiH

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAA TTCCAGCTTG GCTCCATACC ACAAACGATG CAAACGCCCT TGCTTCTTTA 
CTTGCACCCA ATGCAACACG ATCGCTTGAA TCGCTTGCAG CAGAAGCATC GGCTATCACA 
CGCCGCCGTT TTGGACGCAC CATAACGCTC TACGCGCCGC TTTACCTTTC AAACCATTGC 
TCTAACGGCT GCGCTTATTG CGGCTTTGCT TCTGACCGAA CAACGCCGCG CCGCCGCCTT 
GAAATGGAGG AGATTCGCCG CGAAATAGCA GCTATGAAAG CACTCGGCAT TAGCGATATT 
TTGCTCTTGA CGGGAGAGCG CACACCTGCG GCTGATTTCG ACTATTTGCG CCAAAGCGTA 
GCACTTGCGG CTGAAGAAAT GCAGCGCGTT GCCGTTGAAG CCTTCCCCAT GAGCGTAGCC 
GAATATCGAG CCTTAGCGGA GAGCGGCTGC ACCAGCGTTA CCATTTACCA AGAGACCTAC 
AATCGCAAAC AATACGAAGC GCTTCACCGC TGGGGAGCAA AAAAAGATTT TCTCTATCGG 
CTTGAAACGC CTGCCCGCGC ACTTGAAGCC GGCATTAAGC ATGTAGGGCT TGGCGTACTC 
TTGGGACTTT CCGATCCAAT AGAAGATGCC CTTTGCCTCT ACCGCCATGT GCGCCATCTT 
GAACGGCGCT ACTGGCGAGC TGGATTTTCC ATCTCCTTTC CCCGCTTGCG CCCCGAAAGC 
GGCGGCTATC AACCACCATT TCCTGTTGAC GATCGCCAAC TTGCCCGCCT GATTATGGCG 
TTCCGCATTG CACTGCCAAA CATCGAATTA GTACTTTCCA CCCGCGAAAG TGCTCGCTTT 
CGCGATGGCA TGGCAACCCT CGGCATTACT CGCATGAGCG TTGAAAGCCG CACCACTGTT 
GGAGGCTATG CAGAAAACGA AACCATTAAA AGCAGTGCAG GACAGTTTGA AATTTGCGAT 
GACCGCAACG TTGAAGAGTT TTGTGCCGCT TTACGAACAC AGCAGATTGA GCCAATTTTT 
AAGAATTGGG AACGCGCTTA CAATGCGCCA TCAATGAGCT GCTTTTTATA A 

 

Protein sequence

MAEIPAWLHT TNDANALASL LAPNATRSLE SLAAEASAIT RRRFGRTITL YAPLYLSNHC 
SNGCAYCGFA SDRTTPRRRL EMEEIRREIA AMKALGISDI LLLTGERTPA ADFDYLRQSV 
ALAAEEMQRV AVEAFPMSVA EYRALAESGC TSVTIYQETY NRKQYEALHR WGAKKDFLYR 
LETPARALEA GIKHVGLGVL LGLSDPIEDA LCLYRHVRHL ERRYWRAGFS ISFPRLRPES 
GGYQPPFPVD DRQLARLIMA FRIALPNIEL VLSTRESARF RDGMATLGIT RMSVESRTTV 
GGYAENETIK SSAGQFEICD DRNVEEFCAA LRTQQIEPIF KNWERAYNAP SMSCFL