| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1253 |
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| Symbol | |
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| ID | 3748291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1717111 |
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| End bp | 1719333 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637773791 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | YP_379557 |
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| Protein GI | 78189219 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0080071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTA TCTACCAACG CACCTTAACG CTTACTGCTC TTGCAGTAAT GCTTGCACAT
AGTGCACATG CGGCTGAAAA CCAAGAGAGC ACTCAACCAA GCTACATGGC ACCAGAACTG
ATTATTTCAG GGCAAAAAGG TGATGTGCTC CAGCATGTTG TTGGCAAAGA ATCGGTGGTA
TTGAACCCAT CGCAAATGTC GGTTTATAAA GCAATTAACC TTATGCCTTC GCTTAGCCAA
CAAAGCGTTG ATCCTTACGG ACTTGCCGAT ATTGTAAACT ACCATGAATC CTTTCGCTTT
CGTGGCATTG AGGCAACCTC AGGCGGTGTA CCTGCTACTA CGGTAAACGT TGAAGGGTTA
CCCGTTACGG GCAGACCGGG AGGCGGCGCG ACCATTTATG ACCTTGAAAA CTTCAGCTCA
CTCAACATCA ACACGGGCGT TATGCCTGCG CATGTTGGTT TGGGATTAGC CGATGTTGGC
GGCAAAATCA GCATGGAGAT TCGCAAGCCC GAAGAGCAAT TTGGCGTGCA ACTCAAGCAA
GGAATTGGGA GTGATAGCTT TAAGAGAAGC TATCTGCGCA TTGATTCGGG TGATCTTGGT
GATGGCTTGA AAAGCTTTGC TTCCGTCTCA AACAGTAATG CCGACAAATG GAAAGGCGAG
GGCGACAGCG AACGCAACAA TGTTATGATG GGACTTGCTA AACCGTTAGG CAAAAACGTT
ACGCTTGAAA CCTATCTCAC ATGGAGCAAA GGCAATATTC ATACCTACAA GCCGTTAAGC
TATACGCAAC TAAGTGATCT TGATGGAAGC TATAAAAGCG ACTATGGCAC CAATCCAAAT
AGTTACGATT ACTTCGACTA CAACCGCAAT GAATTTGAAG ATTGGATGCT GATGGCAAAC
CTTTCCATTA AAACAGGTGA ACAATCAACC CTTACCATTA AGCCTTATTA TTGGAGCGAC
AAAGGATATT ATCTTGAAAC CATTACACTG GCGAATGGGC AAAATCGCAT CCGTCGCTGG
GATATTGACC ACGACCTCAG CGGTATTCTT TCGGAATTTA GTACCAACGT TGCCGATGTT
GACCTGCGGC TTGGCTATCT CTACCATACC CAAGAACGAC CAGGTCCACC AAATTCATGG
AAAACCTACA AAGTGGTAAA CGGAGCATTA GTATTTGATA CGTGGAGTAT TCTTTCCAAC
CCATCACGCC ATGAATTGCA TTCGCCCTAC ATGGATGCAA CATGGCGCTT TGGAAGCTAT
CAGCTTGAAG CGGGTGCAAA ATTTATTAAC TACACCCTGC CTTCCATTGT AACCTATCAA
ACAACGGGAA TTGGAGATGT TGCCCATGCC GATGCGCTGG CGTTGCAACC AACTCTCGAT
ACCTTTGCAA GTGCAAGTGA TACCAAAAGC TTTAGTCGAG TCTTTCCCAA CCTAACGCTC
ACACACTTTG TAAGCGATAA CCTAACACTC CATGCAGCGT ATGGCGAAAA CTATGTAACG
CATGTTGATA TCTACCCTTA CTTTATTTCA CAACGAGCGC TCTTTGCCGC AAAAAACATT
TCATTTCAAA AGCTATGGAA TGCACGGGAG ATGGAAACCT CGCGCAACGT AGAGTTTGGT
ATGCACGTTA ATGGCAGCAA CTGGAGTATG ACGCCAACGC TCTATTATGC AAAACACATC
AATAAACAAG CGGTTTTGTA TGATCCTGCC CTTAATGCAA CCTATCCCAT GAACAATGCT
GAAGCAACAG GATATGGTTT TGAGCTTGAA GCTGACTACA AACCCTCAAA TGCTTTTAAA
TGGTACGGCT CATTTGCATG GAACCGCTTT TACTATGCGC AAGATATTTA CTCAGAAGGC
GGCAGTTTGA TTGATGTAAA GGGTGAACAA GTGCCCGATG CCCCTGAATT TTTAGCCAAA
AGTATGGTAA GCTGGAAGGT TGGCGACGTT ACACTTTCAC CAATTGTGCG CTACAGCTCA
ACACGCTATG GTGATGTGCT GCATAAGGAA AAAATTGATG CCAACACCTT GTGCGACTTC
GATATTACAT GGAGTAAAGC ACTTGCAGGC TTGAAACAGG TAGATTGCTC GCTCTCTTTT
ATGAATATTT TTGATGAGCG CTACGTCAGC ATGATTAGCA CCTCCGACTA TAAAACGCTA
AAAACTTCCT ATCAACCAGG GGCTCCATTT ACAGTGGTAG CCTCAGTAGC ATTGCATTAC
TAA
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| Protein sequence | MKSIYQRTLT LTALAVMLAH SAHAAENQES TQPSYMAPEL IISGQKGDVL QHVVGKESVV
LNPSQMSVYK AINLMPSLSQ QSVDPYGLAD IVNYHESFRF RGIEATSGGV PATTVNVEGL
PVTGRPGGGA TIYDLENFSS LNINTGVMPA HVGLGLADVG GKISMEIRKP EEQFGVQLKQ
GIGSDSFKRS YLRIDSGDLG DGLKSFASVS NSNADKWKGE GDSERNNVMM GLAKPLGKNV
TLETYLTWSK GNIHTYKPLS YTQLSDLDGS YKSDYGTNPN SYDYFDYNRN EFEDWMLMAN
LSIKTGEQST LTIKPYYWSD KGYYLETITL ANGQNRIRRW DIDHDLSGIL SEFSTNVADV
DLRLGYLYHT QERPGPPNSW KTYKVVNGAL VFDTWSILSN PSRHELHSPY MDATWRFGSY
QLEAGAKFIN YTLPSIVTYQ TTGIGDVAHA DALALQPTLD TFASASDTKS FSRVFPNLTL
THFVSDNLTL HAAYGENYVT HVDIYPYFIS QRALFAAKNI SFQKLWNARE METSRNVEFG
MHVNGSNWSM TPTLYYAKHI NKQAVLYDPA LNATYPMNNA EATGYGFELE ADYKPSNAFK
WYGSFAWNRF YYAQDIYSEG GSLIDVKGEQ VPDAPEFLAK SMVSWKVGDV TLSPIVRYSS
TRYGDVLHKE KIDANTLCDF DITWSKALAG LKQVDCSLSF MNIFDERYVS MISTSDYKTL
KTSYQPGAPF TVVASVALHY
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