Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1250 |
Symbol | |
ID | 3748288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1713589 |
End bp | 1714947 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637773788 |
Product | nitrogenase iron-molybdenum cofactor biosynthesis protein NifN, putative |
Protein accession | YP_379554 |
Protein GI | 78189216 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.113259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACATG AACATGCAAA ATCCGTTACG CAAAACGCTT GTAAGCTTTG CAACCCACTT GGTGCCTGCC TTGCATTCCG TGGCATTGAG CAGTGTGTGC CATTTTTACA CGGTTCGCAA GGGTGCGCCA CCTACATTCG TCGCTATTTA ATTAGCCACT ATAAAGAGCC AATTGATATT GCTTCATCAA ACTTTAACGA AGAAACAGCG GTCTTTGGTG GCAGCCACAA CTTAAAGGTG GGCTTAAAAA ACGTAAGCCA GCAATACAAG CCGCAAGTAA TTGGCATTGC TACAACCTGC TTAAGTGAAA CCATTGGCGA CGATGTACCA CGCATTTTAC GTGAGTACCA AAAAGAGTTT AAAAACGGCA CACCAATGCC GCTTTTGATT CACGCATCAA CGCCAAGCTA CCAAGGGAGC CACATTGATG GATTTCATGC AGCCGTTCAT GCAGCCATTA AAACGCTTGC AACCAAAGGG CAAAAGCAAG AGCAGATCAA CCTCTTTCCC AACATGGTCT CGCCCGCTGA TTTGCGCCAC CTGAAAGAGA TTTTTGCGGA CTTTGAGATT CCGCTCATGA TGTTGCCCGA CTATTCGCAA ACTATGGATG GCGGACCGTG GGCAGAGTAC CACCGCATTC CACCGGGAGG CACGCCAGCA ACGGCTATTG CTGATTCTGC AAATAGCCGT GCAAGCATTG AATTTGGCTC CACTATTGAA GCAAACAAAT CAGCAGCACA CTATCTTGAT GTCATGTTTG GTATTCCAGC GTATCGCATG GCGCTCCCAA TTGGCATTAA AGCAAGCGAT CGCTTTTTCA GCCTGCTTGA AACCTTGAGC GAAAAAGGGC GCCCTGAAAA GTATGACGAT GAACGTCGCC GCTTAGTAGA TGCCTATGCT GACGGACACA AATATGTTTT TGAAAAAAAG GTGATTCTCT ACGGCGAAGA AGACCTTGTA GTTGCCATAA CCGCCTTTTT ACGCGAAATA GGCATGATTC CCGTGCTTTG CGCCTCAGGC GGAAAGAGCG GCATGTTAAA GGAGCGCATT GCAGAAATTG TGCCCGATAT GGAAGAGCTT GGCATTAAAG TGCGCGATGG CGTTGACTTT GTTGATATCG AAGATGAAGC TAAAGTGCTA CACCCCGATT TACTCATGGG CAACAGCAAA GGCTTTACCA TGTCGCGTAA AAATGAGATT CCGCTCTTAC GCCTTGGCTT CCCAATCCAC GACCGCTTTG GCGGGCAGCG TATGCACCAC CTTGGCTACC GCGGCACCCT TGAATTGTTC GACCGCATTG TCAACATGAT TATTGAAACA CGTCAGAACG CATCACCAAT TGGCTACACT TATATGTAA
|
Protein sequence | MKHEHAKSVT QNACKLCNPL GACLAFRGIE QCVPFLHGSQ GCATYIRRYL ISHYKEPIDI ASSNFNEETA VFGGSHNLKV GLKNVSQQYK PQVIGIATTC LSETIGDDVP RILREYQKEF KNGTPMPLLI HASTPSYQGS HIDGFHAAVH AAIKTLATKG QKQEQINLFP NMVSPADLRH LKEIFADFEI PLMMLPDYSQ TMDGGPWAEY HRIPPGGTPA TAIADSANSR ASIEFGSTIE ANKSAAHYLD VMFGIPAYRM ALPIGIKASD RFFSLLETLS EKGRPEKYDD ERRRLVDAYA DGHKYVFEKK VILYGEEDLV VAITAFLREI GMIPVLCASG GKSGMLKERI AEIVPDMEEL GIKVRDGVDF VDIEDEAKVL HPDLLMGNSK GFTMSRKNEI PLLRLGFPIH DRFGGQRMHH LGYRGTLELF DRIVNMIIET RQNASPIGYT YM
|
| |