| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1229 |
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| Symbol | |
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| ID | 3748262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1631078 |
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| End bp | 1632223 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637773762 |
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| Product | homocitrate synthase |
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| Protein accession | YP_379533 |
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| Protein GI | 78189195 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAATT CTGCAATGGA GCTGCGCAAA TCGTGGATTA TTGATACCAC CTTGCGCGAT
GGCGAGCAAG CCCCTGGTGT GGTGTTTAGT GCGGAGGAGA AGCGCGATAT TGCAGCGCAA
CTTGCGGCAG CAGGTGTTAG TGAATTGGAG GTTGGTTACC CCGCCATTAG TGGCGATGAG
TTAGAAACCA TCCGCTCAAT TGTTGCTATG CGTCTGCCTT TGCGTGTAAC AAGCTGGGCG
CGTGCAAAGT GGGATGATAT TGAGGCTGCT CGCCAAAGTG GCACCGAAGC GGTTCATATT
AGTTTTCCTG TATCGGCGCT TTATTTGCAA TTAATGGAGC GCTCTTACGA GTGGGTGCAG
GAGCAGTTAA GCGAATTAAT CGGCAAAGCC AAAGATTATT TCGAGTTTGT GAGTGTTGGG
GCGCAAGATG CCACCCGTGC GGATATTGAG CTGCTTTCGC GCTTTGTTTG TGATGCAAGC
GCGGCAGGCG CTCAGCGCAT TCGCCTTGCC GATACGGTGG GAATTGCCAC GCCAATTTCC
GTGATGCACC TTATTGGGGA ACTGCAACGA GTTACTTCAG TGGATCTTGA ATTTCATGCT
CATAACGATC TTGGTATGGC TACAGCAAAT GCGTTTACAG CCCTTGCTGT TGGTTGCCAA
GCCGTTAGTG TGTCGGTAAC GGGGCTTGGC GAACGGGCGG GCAACGCTGC GCTTGAAGAG
CTTGCAATTG CTTTGAAACT TTCGGGAGAG TTTGAAGCCA CCATAAAAAC TGAAATGTTG
TCGAGCTTAT GCGAAACGGT AAGCAAAGCG GCTGGTAGGG TGATTGATGA GCGCAAAGCC
GTGATTGGCA AAGCTGTTTT TCAGCACGAA TCGGGCATTC ACTGTGCCGC ATTGTTGAAG
CATCCGCTCT CTTATCAGCC ATTTTTACCC GAACAAATTG GCGGTAGAGA GCATGAATTG
GTGATTGGCA AGCATTCGGG AAGTGCGGCT ATTCAGCACT TTTTTGCCGA GCGAGGCATT
CCGCTGAGCC GCAGCGAGGC AACACAGTTG TTAGCAAAGG TTCGCCAAAT GGCGACTGAA
AAAAAAGGAT TGCTTACAGC TAAAGAACTT GAAGAGCTTT ATACAGAACT GTTTAATATT
CATTGA
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| Protein sequence | MPNSAMELRK SWIIDTTLRD GEQAPGVVFS AEEKRDIAAQ LAAAGVSELE VGYPAISGDE
LETIRSIVAM RLPLRVTSWA RAKWDDIEAA RQSGTEAVHI SFPVSALYLQ LMERSYEWVQ
EQLSELIGKA KDYFEFVSVG AQDATRADIE LLSRFVCDAS AAGAQRIRLA DTVGIATPIS
VMHLIGELQR VTSVDLEFHA HNDLGMATAN AFTALAVGCQ AVSVSVTGLG ERAGNAALEE
LAIALKLSGE FEATIKTEML SSLCETVSKA AGRVIDERKA VIGKAVFQHE SGIHCAALLK
HPLSYQPFLP EQIGGREHEL VIGKHSGSAA IQHFFAERGI PLSRSEATQL LAKVRQMATE
KKGLLTAKEL EELYTELFNI H
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