| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1228 |
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| Symbol | |
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| ID | 3748261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1629314 |
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| End bp | 1630963 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637773761 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_379532 |
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| Protein GI | 78189194 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATTA CACAACAAAA CGACTACGGC AGCATCAGTC TTTTAGCTGA AGTAAGCCGC
ACCATTACGC ATGAAGAGGA CATTAACAAA GTGTTACGCT TAGTGCTCTT TATTATGTCG
GAAAACATGC ACATGCAGCG AGGTATGATT ACCATTCTTA ACCGCAGCAC GGGCGAAATT
GTTATTAACG AATCGTTTGG GCTAACCGAA GAGGAGCGTG AGCGTGGACG CTATCACATT
GGCGAGGGTG TTATTGGGCA TGTTGTAAAA ACCGGCAAAG CCGTTATTGT GCCCTCCATT
CAAGATGAAC CGCTTTTTCT TGATAGAACA GGATCGCGTG CTCAAGCAAA AAAAGAGGAA
CTCTGCTTTA TTTGCATTCC GATTAAAGCA GGCTCCGAAA TTATTGGTAC CCTCAGTGCC
GACCGCCACG TAGAACCCGT TACTGCCGAT GAGCATCGCC GCAAAACACG CCAAACCGAC
GACCGTGATG AGCGGATTGA TAAACTCCAA TTTTATGTGG ATCAGCTCTC CATTATTGCC
GCCATGATTT CGCAAGCCGT GCGCTTAAAG CAGCTTGCCT ACGAAGCAGG CAGCAAAAAC
GTGCAAGATT TGAGCAACTT GCCACCTTTT GCAGCCTCCA TTCCACCCCG CAGCGAAGAT
CGCCAAGTTA ACGCCATTCC GCCGCCATCG CCCGATCGCC CAGCAAACAT TATTGGCAAC
ACCAAGCCAA TGGTTTCGCT TTATTCCATG ATTGATAAAA TTGCCAAAAC CAGTGCCACC
ACGCTTGTGC TTGGCGAAAG CGGCGTTGGT AAAGAGTTAG TAGCAAGCGC CATCCACTTT
AAAAGCCGCC GCGCTGAAAA GCCCTTTATT AAATTTAACT GTGCAGCCCT TCCCGAAAAC
ATTGTAGAGA GCGAACTTTT TGGGCACGAA AAAGGAGCTT TTACAGGTGC CCTTGCTACA
CGGCATGGAC GCTTTGAAAT GGCAAACAAC GGCACTATTT TTCTTGATGA AGTGGGCGAA
CTCAGCTTAT CAGTTCAAGC GAAATTGTTG AGAATTTTGC AAGAAAAGGA GTTTGAGCGC
GTTGGCGGCT CAAAAACCAT TAAGGTAGAT GTTCGTGTTA TTGCTGCCAC CAACCGTAAC
CTCGAAGAGC TTATTCGGCA GGGGCAGTTT CGCGAAGATT TATTCTATCG CCTCAACATT
TTCCCCATTA CCGTACCACC CTTGCGCGAG CGTAAAACCG ATATTTTGCT GCTTGCTGAC
TATTTTGTTG AGAAGTATAA CAAAGCCAAT CAGAAAGGAG TACGCCGAAT TTCCACCACA
GCCATTGATA TGCTTATGCG CTACCATTGG CCTGGTAACG TGCGCGAATT GCAAAACTGT
ATTGAGCGTG CGGTTATTTT AAGTGAGGAT AATGTGATTC ACGGCTACCA CTTGCCGCCA
ACCTTGCAAA CGGCGGAATC AAGCGGTACG CCTTACACGG GCTCATTGCA ACAAAAGCTT
GATGCTATTG AAAAGGAAAT GATTATTGAA GCGCTTAAAC GCACGCAAGG CAATATGTCG
CGTGCTGCCA TGCAGCTTGG ATTATCGGAG CGTATTATGG GATTGCGCAT TAAAAAGTTT
AATATTGATT ATAGGAAGTT TAGGGTGTGA
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| Protein sequence | MLITQQNDYG SISLLAEVSR TITHEEDINK VLRLVLFIMS ENMHMQRGMI TILNRSTGEI
VINESFGLTE EERERGRYHI GEGVIGHVVK TGKAVIVPSI QDEPLFLDRT GSRAQAKKEE
LCFICIPIKA GSEIIGTLSA DRHVEPVTAD EHRRKTRQTD DRDERIDKLQ FYVDQLSIIA
AMISQAVRLK QLAYEAGSKN VQDLSNLPPF AASIPPRSED RQVNAIPPPS PDRPANIIGN
TKPMVSLYSM IDKIAKTSAT TLVLGESGVG KELVASAIHF KSRRAEKPFI KFNCAALPEN
IVESELFGHE KGAFTGALAT RHGRFEMANN GTIFLDEVGE LSLSVQAKLL RILQEKEFER
VGGSKTIKVD VRVIAATNRN LEELIRQGQF REDLFYRLNI FPITVPPLRE RKTDILLLAD
YFVEKYNKAN QKGVRRISTT AIDMLMRYHW PGNVRELQNC IERAVILSED NVIHGYHLPP
TLQTAESSGT PYTGSLQQKL DAIEKEMIIE ALKRTQGNMS RAAMQLGLSE RIMGLRIKKF
NIDYRKFRV
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