Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1220 |
Symbol | aroK |
ID | 3748254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1618311 |
End bp | 1618883 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637773754 |
Product | shikimate kinase |
Protein accession | YP_379525 |
Protein GI | 78189187 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.455019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAAAAG AACCCTCTCT TATTTTTCTT ACCGGCTTTA GCGGTTCGGG TAAATCAACC ATTGGTCCGT TGCTTGCTAA TTCGTTGGGT TATGAGTTTG TTGATCTTGA TGCTTTAATT GAGCGTGAAT GCGGTAAGAG CATTAATCAG ATTTTTGCTG AAGCGGGTGA GGCGGCTTTT CGTCAGCATG AAGAGCAAAC CTTAGAAACC CTCTTAATGC GCCGCAAAAC GGTGGTTTCG CTTGGTGGTG GGGTGCTTGA ACAGCCGCGC GCCTTTGAGT TGGTGCGTCA AGCGGGTACT GTTGTCTATT TAAAGTCGCC TGTAAAAACG TTGGCTCGGC GGCTGAGCAA TAAAACGGAT CGCCCGCTTT TAAAGGGTGA GCAGGGTGAA AAGTTGTCGC AGGAGGAAAT TGAGCAAAAA ATTGCGGAGT TGCTTGCTCG GCGTGAGCCT CGTTATGAGT GCGCTGATAT TACGGTGGAG ACGGATGCCA AGCGTATTGG TAGTACGGTT GAGGAGCTTA CTCGTAAAAT TGAGCGTTAT ATGCGCACTC TTGCTTTATC GTCGGAGGAG TGA
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Protein sequence | MQKEPSLIFL TGFSGSGKST IGPLLANSLG YEFVDLDALI ERECGKSINQ IFAEAGEAAF RQHEEQTLET LLMRRKTVVS LGGGVLEQPR AFELVRQAGT VVYLKSPVKT LARRLSNKTD RPLLKGEQGE KLSQEEIEQK IAELLARREP RYECADITVE TDAKRIGSTV EELTRKIERY MRTLALSSEE
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