| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1203 |
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| Symbol | |
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| ID | 3748237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 1597682 |
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| End bp | 1600849 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637773737 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_379508 |
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| Protein GI | 78189170 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0458875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAGC GTTTTATTTC CCGCCCTGTA CTTGCCACCG TTATCTCCAT TTTGTTAGTG
ATTCTTGGTG TGGTAGGTCT TTCGCAATTG CCCGTTACCC GCTTCCCCGA TATTGCGCCG
CCAAGCGTTT CAGTGTCGGC AACCTACCCG GGGGCAAGTG CTGAAACGGT GGCTCGTAGT
GTGGCTCCAC CGCTTGAGGA GGTTATTAAC GGTGTTGAAA ACATGACCTA CATGACTTCA
ACCTCTTCCA ATGACGGATC GCTAAACATT TCCGTTTTTT TTAAGCAAGG CACTAACCCC
GATCAAGCTG CGGTTAATGT GCAAAATCGA GTGTCGCAAG CTACAAGCCG TTTGCCAGCA
GAAGTAAATC AAATTGGTGT TAGTACGGTG AAGCGGCAGA ATAGCCAGAT TATGCTCATC
AACTTAGCCA GCACCAATCC TGAGTATGAT GTGGTCTTTT TGCAGAATTA TGCAAAAATC
AATCTTGTTG ACGATTTATC GCGTGTTCCG GGTGTTGGGC AGGTTTCGGT ATATGGCAAC
CTCGATTACT CAATGCGCAT TTGGCTAAAG CCGCAAGTAA TGGCAGCTTA TAGCATAACG
CCACAAGAGG TGCTATCGGC AATTCAAAGC CAAAACTTTG AAGCGGCGCC CGGCTCATTT
GGTGAAAACA GCAATGAAGC CATGCAGTAC GTGATGCGCT ACAAAGGCAA GAATCGCTAT
CCGGTGGAAT ATGAGCAAAT GGTGATTCGT GCGGGAGAGG ATGGCACTTT ACTGCGTTTG
GGTGATGTTG CACGAGTGGA GTTTGGGGCG TACCGTTACG GCGTAAACAC CAAAGCAAAT
GGTTTACCAG CAGTTGTGTT GGCTATTTTT CAAGCGCCCG GTTCCAACGC TAATGCCGTT
GAAAGTTCCC TCCAAAAAGT GCTGCAAAAA GTATCTCCCA CCTTTCCCAA AGGCATTACT
TACAGTATTC CATATAGTTC AAAAAAAGTT GTTGACGAGT CCATCACTCA AGTACTTCAT
ACCTTAATAG AAGCCTTTTT GCTGGTCTTT CTCGTGGTCT TCATTTTTTT GCAAGATTTA
CGCTCCACCT TAATTCCTGC AATTGCGGTG CCTGTGGCGC TTGTGGGCAC CCTCTTTTTT
ATGAAGCTCT TTGGATTTTC CATTAACGTG CTGACGCTTT TTGGCTTAGT GCTCGCCATT
GGCATTGTGG TGGACGATGC CATTGTGGTG GTTGAAGCGG TTCACGCTAA AATGGAGCAA
AAGGGCTATG GCGCTAAAGT GGCAACGGTT TCGGCAATGC GCGATATCAC TAAAGCTATT
GTAACCATCA CGTTGGTGAT GTCCTCCGTT TTTTTGCCTG CGGGATTTTT AGAGGGTTCA
ACAGGCGTGT TTTATCGCCA ATTTGCTTTT ACGCTTGCTA TTGCCATTCT GCTTTCAGCG
CTGAATGCCT TAACGCTTAG CCCAGCACTT TGCGCCCTTT TTCTTGAAAA AGAGCATCGC
CACTCATCCA TTGGCAAGCG CTTTTTTACC TCCTTTAACA CGGCGTTTGA GGCAATGAAG
CGCAAGTACC TTGGCGCCTT GCTCTACCTT CTTCGCCATA AAAAAGTTGC ATACAGTGGT
TTGGCGCTGC TTACAGCACT TTCGTTTTGG ATGTTTAAAG CTACTCCCAC CGCATTTATT
CCCGATGAGG ATAATGGCTT TGTAATTGTG TCGGCAACCA TGCCTCCGGG CGCTTCGTTT
GCGCGTACCA AAGTGGTGAT GGATGACGCT GCTCGCACAT TGCAAGCTAT GCCAACGGTA
AAAAAGGTGA TTGAGGTTGC AGGCATTAAC ATTTTAACCC GTACTTCGTC GCCCTCTTCA
GGCTTGCTCT TTGTGCAGTT GCAAGATCAC AACGTGCGTG GCAAGCAGGG TGATATTAAG
AATGTGATTG GGGCGATGTC GAAAAAATTA GCCAATCGCG AAGCCTCATT TTTTGTGTTG
GCACAACCAA CGGTGCCGGG TTTTAGCACC GTTGGTGGAC TTGAATTAGT GCTGCAAGAT
CGCAACGGAG TGGAACTTAG CCGCTTTAAT GAGATTGCTC AAAACTTTCT GAATGGCTTG
CGGCAGCATC CCGCTATTGG GGTGGCATTT ACCAACTTTA AGGCAAATAA TCCTCAATAT
GAGCTTGAAG TTGACCCCAT GCAGGCAAGC CAGCTTGGCG TAAGTACGCG CGATGTTATG
AGCGTGCTGC AAGCTTACTA CGGTAGTGTG CAAGTCTCCG ATTTTAACCG CTTTGGCAAA
TATTATCGTG TTATTATGCA AGCGGAACCA AGCGAACGCA CCGATGAATC CTCAATCAAT
AGCATGTTTA TTCGCAATGT GCGTGGCGAT ATGGTGCCAC TCTCTTCGGT TGTGCGCTTA
AAGCGAGTTT ATGGCGTTGA AGCCGTTGAC CACTTCAACC TCTTTAATGC TATTTCGGTT
AATGCCGTTG CCAAACCCGG CTTTAGCACA GGGCAGGCAA TTCAAGCTGT TGACGATGTG
GCACGTAAAA CGCTGCCCAC AGGTTTTACC TATGATTGGA AAGGGCAAAG CCGCGAAGAA
ATTTCAGCCA GCGGAGGTTT ACTCCTCATT TTCTTGCTCT CCATTATCTT TGTCTATTTT
TTGCTTGCGG CATTGTACGA AAGCTATCTT TTACCACTTG CGGTTATGCT CTCCATTCCA
ACAGGATTGT TGGGAGTTTT TATTGGCATC AAATTAGCAG GCATTGCAAA CAACATTTAT
GTGCAAGTTG CCATTATCAT GCTTATTGGT TTGCTGGCAA AAAATGCCAT TCTTATTGTG
GAATTTGCCC TTCAGCGCCG CATTGCAGGG CGCCCACTTG CGGTTGCAGC CATTGAGGGC
GCTCGTGCTC GCCTTCGCCC CATTCTTATG ACCTCGTTTG CTTTTATGGC TGGCTTGCTG
CCACTGCTTT TTGTGTCGGG TCCAGCCGCT CAAGGTAACC ACTCCATTGG CGCTGCGGCG
CTTGGCGGTA TGTTTGCGGG TTTAGTGTTT GGTATTCTTG TGGTGCCGCT GCTTTTTGTA
ACGTTCCAAT ATCTGCAAGA GCGTATTACC GGTGTTGCAA AGCCAATTGT TGAAGCGGGG
GATTTGTTGG ATGCTGTGGT GATGAAAGAG AAAGGAACTC ATGTGTAA
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| Protein sequence | MFERFISRPV LATVISILLV ILGVVGLSQL PVTRFPDIAP PSVSVSATYP GASAETVARS
VAPPLEEVIN GVENMTYMTS TSSNDGSLNI SVFFKQGTNP DQAAVNVQNR VSQATSRLPA
EVNQIGVSTV KRQNSQIMLI NLASTNPEYD VVFLQNYAKI NLVDDLSRVP GVGQVSVYGN
LDYSMRIWLK PQVMAAYSIT PQEVLSAIQS QNFEAAPGSF GENSNEAMQY VMRYKGKNRY
PVEYEQMVIR AGEDGTLLRL GDVARVEFGA YRYGVNTKAN GLPAVVLAIF QAPGSNANAV
ESSLQKVLQK VSPTFPKGIT YSIPYSSKKV VDESITQVLH TLIEAFLLVF LVVFIFLQDL
RSTLIPAIAV PVALVGTLFF MKLFGFSINV LTLFGLVLAI GIVVDDAIVV VEAVHAKMEQ
KGYGAKVATV SAMRDITKAI VTITLVMSSV FLPAGFLEGS TGVFYRQFAF TLAIAILLSA
LNALTLSPAL CALFLEKEHR HSSIGKRFFT SFNTAFEAMK RKYLGALLYL LRHKKVAYSG
LALLTALSFW MFKATPTAFI PDEDNGFVIV SATMPPGASF ARTKVVMDDA ARTLQAMPTV
KKVIEVAGIN ILTRTSSPSS GLLFVQLQDH NVRGKQGDIK NVIGAMSKKL ANREASFFVL
AQPTVPGFST VGGLELVLQD RNGVELSRFN EIAQNFLNGL RQHPAIGVAF TNFKANNPQY
ELEVDPMQAS QLGVSTRDVM SVLQAYYGSV QVSDFNRFGK YYRVIMQAEP SERTDESSIN
SMFIRNVRGD MVPLSSVVRL KRVYGVEAVD HFNLFNAISV NAVAKPGFST GQAIQAVDDV
ARKTLPTGFT YDWKGQSREE ISASGGLLLI FLLSIIFVYF LLAALYESYL LPLAVMLSIP
TGLLGVFIGI KLAGIANNIY VQVAIIMLIG LLAKNAILIV EFALQRRIAG RPLAVAAIEG
ARARLRPILM TSFAFMAGLL PLLFVSGPAA QGNHSIGAAA LGGMFAGLVF GILVVPLLFV
TFQYLQERIT GVAKPIVEAG DLLDAVVMKE KGTHV
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