Gene Cag_1189 details

Gene Information

• Locus tag: Cag_1189
• Symbol: recR
• ID: 3748223
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 1583846
• End bp: 1584460
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637773723
• Product: recombination protein RecR
• Protein accession: YP_379494
• Protein GI: 78189156
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.00843682
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATTTC CTTCCGTTGC GCTTGATACT CTGATTGACG AATTTGCAAA GCTTCCCGGT 
ATTGGGCGCA AAACTGCTCA ACGCTTGGCT ATGTACATTT TGCATGAGCC AAAAATAGAG 
GCGGAGCAGT TAGCTAAAGC GCTGCTTGAT GTTAAAGAAA AAGTGGTGCG CTGTACCATT 
TGCCAAAACA TTACCGATGT TGGCACCGAC CCTTGTGCTA TTTGTGCCAG CAAGGCTCGC 
GATCGCACGG TAATTTGCGT GGTTGAGTCG CCCGTAGATA TGTTGGCTTT TGAAAAAACA 
GGGCATTACA AAGGCTTGTA CCATGTGCTC CATGGCGTTA TTTCGCCGCT TGATGGTGTA 
GGACCCGATG ACATTAAAGT GCGTGAGTTA TTAGCCCGCA TTCCTGTTGG CGAGGCTTCG 
GGAGTGCGCG AAGTGGTGTT GGCATTAAAT CCCACCATTG AGGGTGAAAC AACATCGCTG 
TATTTAGCGC GTTTATTGAA ACCGCTTGGT ATTGCCGTTA CTAAAATTGC ACGAGGCATT 
CCTGTTGGTG CCGAGCTTGA GTATGTGGAT GAGGCAACGT TATCGCGAGC TATGGAAGGG 
CGCACAGTGG TATAG 

 

Protein sequence

MRFPSVALDT LIDEFAKLPG IGRKTAQRLA MYILHEPKIE AEQLAKALLD VKEKVVRCTI 
CQNITDVGTD PCAICASKAR DRTVICVVES PVDMLAFEKT GHYKGLYHVL HGVISPLDGV 
GPDDIKVREL LARIPVGEAS GVREVVLALN PTIEGETTSL YLARLLKPLG IAVTKIARGI 
PVGAELEYVD EATLSRAMEG RTVV