| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1179 |
|---|
| Symbol | |
|---|
| ID | 3748213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1572707 |
|---|
| End bp | 1574419 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637773713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379484 |
|---|
| Protein GI | 78189146 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4715] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTC CTCTGAATCA GTTTGAAAAC TATATAGATG AGACGATTCT CAAAAGAGGG
CTTTCTTACT TTAAAAATGG ATATGTTCAC GAGCCTGAAG AAATCAAGCA GGGAGAATTT
GAAGCGCTTG TGGAAGGCAC CGAAGATTAT ACGGTTCGCC TAACCATTGA AAAAGGTATT
ATTACCGACT ATTCCTGCAC CTGCCCTTAT GATTATGGAC CTATCTGTAA GCATATAACT
GCCCTTATTT TTTATTTACA GCAAGAAGAG CTTGGCTTAG AAGTGCAGCC TCCAAAAAGT
AAAACAACTA CCACCAAAGC AAAAAAAACT ACAAAACGTA AAACCATAGC CGAACAAGTA
GATGAATTGC TTGATAAAGT AAACCACGAT GAGCTTAAGC AATTTGTTAA AAAAACAGTT
TTGGCTGATA AAAAATTACG TCAAAACTTA ATATTACATT TTTTTCATTT AACTACAAAT
GAGGACTCGA AAGATTTTTA TGCACAACAA ATAAAAACAA TCTTACAAAT CGCAAAAGAT
AGTGATGGAT ATATTTCTTA TTCGGCTGTA CATAATGTGT GCAACATTAC AGACCAATAT
CTTGCAGCAG CTCAAAATGA GATTGCTAAT AACAAGTACA ACAAAGCGAT TTCTATTTGC
ACGGCTGTAA TAGAGGAAAT GACAAAAGGG CTACAATTCA CGGATGATAG TGATGGATAT
ATAGGAGACG CTATTTTTGA AGCATTAGAA ATACTTCAAA ATATTGCAAA AAGTAATCCA
CCTGAAACTG TTCGTATTCA ATTACTTGAG TATGCCATAT CAGCCTATAA AAAATCTTGT
TTTGATGGGT GGAATGATCA TTTTGACATG ATACATTTTG CCACATTACT TGTAAAAAAA
GATGTTGAAA TTAATAACCT TATTGATATA CTCAAAAATA GTATTCATAC GGCTCACTAT
AAAGAAAAAG TTCAAGAAAT TATTTATGAA CTACTTGTTA AGTTTAAAAA ATTGGAAGAG
GCTGAAACCT ATCTCGAACA AAATATATCG AATTCTTCTT TTAGATTAAA AGTTCTTGAA
ACTGCTTACC AAAATCATAA TTACAGCAAA GCAAAATTAC TAGCGAATGA TGCTATTAAG
CAAGAGAATG GTATAAGTAA TAGTACTTGG TATGAATGGT TGTTAAAAAT TGCTCAAGCG
GAAAATAATA TAAAAAGTAT TATTGAGGTT GCTCGTTATT TACTTCTTCA GGGTTATGAT
AGTGAATGTG ATACCTATTA TGCTTTATTG CAACAGCATA TTGCGCCTGA AGAATGGAAT
GGTTTTGTTG AAAAAATGAT TGCTGAAATA AAAAAGAAGC CATACCATCT GCATTATTGG
TTGCTGCCAA AATTTTATAT TAAGCAAGAA CAATGGGAGC GTCTCTTAAA TTTTGTTCAG
TCAACAGAGA GAATAGATAT ATTAATGACC TATGATAAAT ATTTAGTGAA TAACTACTTT
ACGGAAATTA TGGATATGTA TAAAAAATAT ATTTTACATT CATTAAATCG TGCAGCTCAA
CGAAACGAAT ATCAAAAAGC GTGTGAATAT ATCCAAAGAG TTGTAACATT GGGTGGAGTA
CGAACTGCTG AAATAATTAT TTCCTATTTA AAAAATAATT ATCCACGAAG ACCTGCTTTA
ATGGAAGAGT TAAGTCATAT TAAGCTGCGC TGA
|
|---|
| Protein sequence | MQIPLNQFEN YIDETILKRG LSYFKNGYVH EPEEIKQGEF EALVEGTEDY TVRLTIEKGI
ITDYSCTCPY DYGPICKHIT ALIFYLQQEE LGLEVQPPKS KTTTTKAKKT TKRKTIAEQV
DELLDKVNHD ELKQFVKKTV LADKKLRQNL ILHFFHLTTN EDSKDFYAQQ IKTILQIAKD
SDGYISYSAV HNVCNITDQY LAAAQNEIAN NKYNKAISIC TAVIEEMTKG LQFTDDSDGY
IGDAIFEALE ILQNIAKSNP PETVRIQLLE YAISAYKKSC FDGWNDHFDM IHFATLLVKK
DVEINNLIDI LKNSIHTAHY KEKVQEIIYE LLVKFKKLEE AETYLEQNIS NSSFRLKVLE
TAYQNHNYSK AKLLANDAIK QENGISNSTW YEWLLKIAQA ENNIKSIIEV ARYLLLQGYD
SECDTYYALL QQHIAPEEWN GFVEKMIAEI KKKPYHLHYW LLPKFYIKQE QWERLLNFVQ
STERIDILMT YDKYLVNNYF TEIMDMYKKY ILHSLNRAAQ RNEYQKACEY IQRVVTLGGV
RTAEIIISYL KNNYPRRPAL MEELSHIKLR
|
|---|
| |