Gene Cag_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1166 
Symbol 
ID3747922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1561050 
End bp1561901 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content41% 
IMG OID637773700 
Productrod shape-determining protein MreC 
Protein accessionYP_379471 
Protein GI78189133 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAAGT TTTTTACCCT TTTGATAAAG TACAATGCGT ACCTACTGCT TGCTCTTTAC 
TGTAGTATTG CATTATTGGT TATAAAACTT CAGGAAGAGG AGATTTTTGT TGAGTTGCGT
AATAACGGCT TAGAGTTTAG TGCGGCTGTT AATGAGCAAT TTATGAGCAT TGCCTACTTC
TTACATTTAA GCCATGAAAA TAGTCGCTTG ATGCGCTTGA ATACCGATTT GCTCAACAAA
ATTCTTCATT ACGATAACAT TTTGCTTGAA GAACGTCGCT ATAAAGCACT CTTTAGCGAT
TCAACCTTTA ATGCTTCGCC TTACATTAAA GCTCAAGTGG TTGATCGCAA ATTTAGTGCC
ACCGATAATA TGCTTATTAT TGATTCGGGC TGGCGGCATG GGGTAAAAAA GGATATGGCT
GTGCTTGTGC CGCAAGGTCT TGTAGGGCGC GTGGTTGCTG TATCTGAAAA TTATGCAAAA
GTGATGCCTG TTATTCATCC CGATTTTAGG GTGTGTGTGG TTGCTGATTC ATCAAATTGT
AGTGGTATTC TTGTGTGGAA TGGTGGGCGT GAGTGGATTG CCAATGTTGA TCATATTCCT
ATTAGTAGCC GTTTGCGTTT AAATGAGCAA TTTCGCACGG CTGATTTTAG CACCTTTGCT
TTGCGTGGAA TTCCTGTTGG GCGCATTGTG CGTATTGTGC CCGATAAGTT GTTTTACACG
GTTGATGTTC GCTTAGCTGT TGATTTTTCT GCATTGCATT ATGTGTTGGT TGCCCCTCAA
AAAGTTGAAG CTGAAAAAGT TCGCATAGTA AGCGATAGTA GTGCTGCTCT GTTACGTACT
CCACAATTGT AA
 
Protein sequence
MQKFFTLLIK YNAYLLLALY CSIALLVIKL QEEEIFVELR NNGLEFSAAV NEQFMSIAYF 
LHLSHENSRL MRLNTDLLNK ILHYDNILLE ERRYKALFSD STFNASPYIK AQVVDRKFSA
TDNMLIIDSG WRHGVKKDMA VLVPQGLVGR VVAVSENYAK VMPVIHPDFR VCVVADSSNC
SGILVWNGGR EWIANVDHIP ISSRLRLNEQ FRTADFSTFA LRGIPVGRIV RIVPDKLFYT
VDVRLAVDFS ALHYVLVAPQ KVEAEKVRIV SDSSAALLRT PQL