Gene Cag_1162 details

Gene Information

• Locus tag: Cag_1162
• Symbol: smpB
• ID: 3747918
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 1556294
• End bp: 1556767
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637773696
• Product: SsrA-binding protein
• Protein accession: YP_379467
• Protein GI: 78189129
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAAAAC AACCTCAACA GCGTTACGCT GAAGCTATTG TAAACCGTAA GGCACGCCAC 
GAGTTTGAAA TTATAGAGAC TTTTGTGGCA GGTATTCAGC TTGCGGGCAG CGAAGTAAAA 
TCGGTGCGGC TGGGGCAAGC AAGCTTAAAC GAAAGTTTTG CGATCATTCT CCGCAACGAG 
GTATGGCTTG AAAACATGCA AATTACCCCA TACAAGCATA ACCGCATGGA AGTGCTTGAG 
GCAAAACGAA GCCGAAAGTT GCTGTTGCAT AAAAAGGAGA TTGCTAAGTT GCAAGCGAAG 
GTGAGTGAAA AAGGGCTCAC CTTAGTTCCT TTAAAAGCTT TTTTTACGCC TCATGGACTG 
CTTAAAATTG AGCTTGCCAT AGCACGCGGC AAAAAATTGT ACGATAAACG TGAAACCCTT 
AAAAATCGCG AAAACCAACG TCATCTCGAT CAACTCAGAA AACAGTACTC ATGA 

 

Protein sequence

MSKQPQQRYA EAIVNRKARH EFEIIETFVA GIQLAGSEVK SVRLGQASLN ESFAIILRNE 
VWLENMQITP YKHNRMEVLE AKRSRKLLLH KKEIAKLQAK VSEKGLTLVP LKAFFTPHGL 
LKIELAIARG KKLYDKRETL KNRENQRHLD QLRKQYS