Gene Cag_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1154 
Symbol 
ID3747873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand- 
Start bp1547669 
End bp1548748 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content44% 
IMG OID637773688 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD 
Protein accessionYP_379459 
Protein GI78189121 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00133003 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTA TTCAAGAAAT TTATGAGTAT CTCTCTCGTT TTTTTACTCC AGTTGAGCTT 
ATTGGTAATG GCGAAGAGCT TATTCATGCA CCAGCCAAAA TTGAGAGTGC TCAAGCGGGA 
GAGGTAACCT TTGTTGCTAA TAAAAAGTAT CTCCGTTTTC TTGCTCTTAC CGAAGCTTCG 
TTAGTGATTG TTGAGCGTTC ATTAGCGGTG GAAGAATATG TGGGGAAACA CTCTTTTTTA 
AAGGTTAATG ATCCATATTC GGCGTTTGTT TTTTTACTCC AACGTTTTAT TCCACCTCGT 
CGCATAGCAA AGCAAGGTAT TGCAGCTACA GCTTCTATTG GTAGTAATGT TACCATAGGT 
GAGAATGTTA GTATAGGGGA ATATGCCGTT ATTGGTGAAC ATTGCTCAAT TGGTAACAAC 
ACGGTGATTG CTGCCCACTC GGTTTTGCTT GATCATGTTA CCATTGGCAG TGATGTAGTG 
CTTTTTCCGC ACGTAACATG CTATGATGGT ACGCGCATTG GCAACCGTGT AGTGATTCAT 
TCTGGTGCTG TTATTGGAGC TGATGGCTTT GGTTTTGCCC CTCAACAAGA TGGTTCTTAT 
ATAAAAATTC CTCAGATAGG TATTGTTGAA ATTGGCGATG ATGTAGAAAT TGGAGCCAAT 
ACCACTATTG ATCGTGCAAC GCTGGGTAGC ACGGTTATTG AATCGGGGGT TAAGTTAGAT 
AACCTTGTTC AAGTTGCCCA TAACTGCCGT ATTGGTGCGC ATACGGTTAT TGCCGCACAA 
GCAGGCGTGT CGGGTAGTAC CACACTTGGT AACCATTGTA TTGTTGGTGG ACAAGTGGGC 
TTTGCTGGGC ATATTGAGGT GAGTGACCAT ATTCAAGTGG CAGCAAAAGC TGGAGTGTCA 
AAATCATTTA TGCAATCGGG GATAGCCTTA CGCGGTTATC CAGCGCAACC CATGCGTGAG 
CAGTTAAAGT ACGAAGCCCA ACTGCGCACG GTAGGAGATT TGCACGCAAA ACTCAAAGCA 
CTTGAGCAAG AGCTTAAGGC TTTGCGTGGC AGCGAAATGC CGTTACAAAA CACCTTATGA
 
Protein sequence
MMTIQEIYEY LSRFFTPVEL IGNGEELIHA PAKIESAQAG EVTFVANKKY LRFLALTEAS 
LVIVERSLAV EEYVGKHSFL KVNDPYSAFV FLLQRFIPPR RIAKQGIAAT ASIGSNVTIG 
ENVSIGEYAV IGEHCSIGNN TVIAAHSVLL DHVTIGSDVV LFPHVTCYDG TRIGNRVVIH 
SGAVIGADGF GFAPQQDGSY IKIPQIGIVE IGDDVEIGAN TTIDRATLGS TVIESGVKLD 
NLVQVAHNCR IGAHTVIAAQ AGVSGSTTLG NHCIVGGQVG FAGHIEVSDH IQVAAKAGVS 
KSFMQSGIAL RGYPAQPMRE QLKYEAQLRT VGDLHAKLKA LEQELKALRG SEMPLQNTL