| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1152 |
|---|
| Symbol | |
|---|
| ID | 3747871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1546349 |
|---|
| End bp | 1547050 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637773686 |
|---|
| Product | OmpA family protein |
|---|
| Protein accession | YP_379457 |
|---|
| Protein GI | 78189119 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000620554 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAT CACTTTACAA AATAGCCAAA CCCGTAGCGC TTCTTCTTAT TCCCGCAACA
CTTAGCGTAA CGTGGGGCTG CCAAACCACA ACACCATCCT CTAATGCAGC ACAAAAAGCT
AAAATTGGCG CTGCGGCTGG CGGTGCCATT GGAGCGCTTA TTGGTAGCCG CACAGGAAGT
TGGGCAAAAG GTGCTCTTAT TGGTGCCGTT GTTGGCGGCG CAAGCGGTGC AGTACTTGGT
AACTATATGG ATAAACAAGC GGCGGCTATT GATCAAAATG TTGAGGGAGC ACAAGTGCAA
CGCGTAGGCG AAAGCATTCG TGTCGTGTTT GATTCAGGGC TCCTTTTTAC CACAGGTTCC
TCAACAATCT CGGCAGCAAG TAGAAGCAAT ATTGAGCAAC TTGCTCGTAT TCTTAATACG
TATGGCGATA CCAATGTGGT TATTGAAGGG CATACCGATA GCATTGGCAA TGAAGCTACA
AACCAAGTAC TTTCAGAAAA ACGGGCAGAA TCAGTTGCCA CACTCCTCAA AGTATATGGT
GTTGCGCCAA ACCGCATGTC AGCCGTAGGA TATGGTGAAA CGCGACCCGT TGCCACCAAC
GAAACAGAAG CTGGACGCAA CCTTAATCGT CGTGTTGAGG TACTCATTTA CGCAACTGAT
GCTTTGCGCC AGCAAGCTGC GTCAGGACAA CTACGTCTTT AA
|
|---|
| Protein sequence | MALSLYKIAK PVALLLIPAT LSVTWGCQTT TPSSNAAQKA KIGAAAGGAI GALIGSRTGS
WAKGALIGAV VGGASGAVLG NYMDKQAAAI DQNVEGAQVQ RVGESIRVVF DSGLLFTTGS
STISAASRSN IEQLARILNT YGDTNVVIEG HTDSIGNEAT NQVLSEKRAE SVATLLKVYG
VAPNRMSAVG YGETRPVATN ETEAGRNLNR RVEVLIYATD ALRQQAASGQ LRL
|
|---|
| |