| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1146 |
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| Symbol | |
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| ID | 3747864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1541849 |
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| End bp | 1543129 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637773679 |
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| Product | hypothetical protein |
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| Protein accession | YP_379451 |
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| Protein GI | 78189113 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01053] zinc finger domain, LSD1 subclass |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00972968 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCAC TACTTGTTTT TATAACATCA CTTATTATCC TTGCCGCCCT TGCAACAGCG
CTTCCTAATC TGCTTATTAA TCCGGGAAAA TTAACAAAAG GGCATAAACA CCTCGACACG
AATTGCCTTG CCTGCCATAC CCCATTTCAA AGCGTTAGCT CGGTGCAGTG CATTAGTTGC
CATAAGCCAA ACGATATTGG CGTAAAAACA GTAGCTGGTG TTGTTCTCCC TAAAAACAGC
AAGAAAGTTC CGTTCCATAA AGGCGTTGCG ACTAACTCCT GCATTGAATG CCATAGTGAT
CATAAAGGCA GAATTCCAAC GAAAGCACTG AAGCCATTTA TGCACGCTTC ACTGCCGCAA
TCCATTAAAA ACAATTGCAT AAGTTGCCAC ACACAACAAC AACCTGTAGA TGCTTTGCAT
AAAAAAGTTT CATCAAATTG TGCTGAGTGT CATACAACAA AACAGTGGAA ACCGGCCACT
TTCGATCATA AAAAAATTAC TGCTTCTGTT GCAAAAGAGT GCATCAGTTG CCATAAGAGC
GACTTACCAA ATGATAAGCT CCATGCTAAT GTCTCCTCAA ATTGTGCAGA GTGCCATCGC
ACAACAAAAT GGAAGCCAGC TACGTTTGAC CACAAGAATC TTGCTGCCTT AGGTGAAAAA
TCGTGCATTG CTTGCCATAA GAGCGACTTG CCAAACGATA AGCTCCATGC TAATGTCTCC
TCGAATTGTG CAGAGTGCCA TCGCACAACA AAATGGAAAC CGGCTACGTT TGACCACAAG
AATCTTGCCA CTTTAGGTGG CAAATCCTGC ATTGCCTGCC ATAAGAGCGA CTTGCCAAAC
GATAAGCTCC ATGCTAATGT CTCCTCAAAT TGCGCAGAGT GCCATCGAAC AACAAAATGG
AAGCCAGCTA CGTTTGACCA CAAGAATCTT GCCACTTTAG GTGGAAAATC GTGCATTGCT
TGCCATAAGA GCGACTTACC AAACGATAAG CTCCATGCTA ATGTCTCCTC AAATTGCGCA
GAGTGCCATC GCACAACAAA ATGGAAACCG GCTACGTTTG ACCACAACCG ATACTTCAGG
CTTGATAGCG ACCATCGTGT AAGTTGTGCC ACATGCCATA CCGAACAAAA CAATTACAAA
AGGTACACCT GTTATGGCTG CCATGAACAT TCGCAAGCAC GTATTGCAGC CGAGCATATC
AAAGAAGGCA TTGCAAACTA CAACAACTGC ATGAAGTGCC ATCGCAATGG CAAAGCTGAA
GAGAAAGGAG ATGATGATTG A
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| Protein sequence | MKPLLVFITS LIILAALATA LPNLLINPGK LTKGHKHLDT NCLACHTPFQ SVSSVQCISC
HKPNDIGVKT VAGVVLPKNS KKVPFHKGVA TNSCIECHSD HKGRIPTKAL KPFMHASLPQ
SIKNNCISCH TQQQPVDALH KKVSSNCAEC HTTKQWKPAT FDHKKITASV AKECISCHKS
DLPNDKLHAN VSSNCAECHR TTKWKPATFD HKNLAALGEK SCIACHKSDL PNDKLHANVS
SNCAECHRTT KWKPATFDHK NLATLGGKSC IACHKSDLPN DKLHANVSSN CAECHRTTKW
KPATFDHKNL ATLGGKSCIA CHKSDLPNDK LHANVSSNCA ECHRTTKWKP ATFDHNRYFR
LDSDHRVSCA TCHTEQNNYK RYTCYGCHEH SQARIAAEHI KEGIANYNNC MKCHRNGKAE
EKGDDD
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