Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1118 |
Symbol | |
ID | 3748336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1508225 |
End bp | 1509139 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637773649 |
Product | tyrosine recombinase XerD |
Protein accession | YP_379423 |
Protein GI | 78189085 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACAC TGAGCAGTAG CTACCAAACC ACACTCAACA GCTTTCTTAA CTACCTTATT GTTGAGCGCA ACTTTTCCGC CAACACACGC TCATCCTATC ATAACGATTT ACACCGCTAT CTGCTTTTTG TGCAAGAACA AGCTACACCT ATAGCAGAAA TTACGTCCAA AGTAATTGAT AGATTTCTTG CTGAACTTGT GGCGCTTGGG CTTGAAACTA CTTCAATGGC ACGCAACATT TCTACGATTC GTTCATTTCA TAAATTTTTA CACAATGAAC GGCTCAGTAG CAACAATCCT GCCGAGCGAC TTCATCTCCC TAAAAAAGCG CACTATTTGC CAGCCGTTTT AAATCTCTCC GAAACGCTTG CTTTGCTTGA AGCGCCCTCG ATTATGCAGC CAGCGCCTAC GTATGCTTTG CGCGATCGTG CTATGCTTGA GCTACTTTAC GCCACAGGCG TGCGAGCCAC CGAGCTTATT TCTATTCAGC AAGAGCATCT TTATAGCGAT GCGGGATTTA TTCGGATTTT TGGGAAAGGT TCAAAAGAGC GTTTGGTGCC AATTGGTGCG TCGGCTACTC TATGGGTGCA GCGCTATCAA AAAGAGTTGC GGGTGCAGTT GGTAAAAGCG CACTCGAATG ATTTTCTTTT TTTAAATAGT CGAGGTGGAA AGCTTTCGCG GATGAGCCTT TTTGAGATGG TAAAAACCTA CAGTGTTGTT GCAGGCATTA CCAAATCTAT TAGTCCGCAT ACGTTGCGTC ACACTTTTGC AACGCATCTC ATTGAAGGTG GCGCCGATTT ACGTGCGGTG CAGGAAATGC TTGGGCATAG TTCTATTGTT ACCACACAAA TCTACACGCA CTTAGATCGT TCTTTTATTA AAGAGGTGCA TAAAACATTT CACCCAAGAG GATAG
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Protein sequence | MSTLSSSYQT TLNSFLNYLI VERNFSANTR SSYHNDLHRY LLFVQEQATP IAEITSKVID RFLAELVALG LETTSMARNI STIRSFHKFL HNERLSSNNP AERLHLPKKA HYLPAVLNLS ETLALLEAPS IMQPAPTYAL RDRAMLELLY ATGVRATELI SIQQEHLYSD AGFIRIFGKG SKERLVPIGA SATLWVQRYQ KELRVQLVKA HSNDFLFLNS RGGKLSRMSL FEMVKTYSVV AGITKSISPH TLRHTFATHL IEGGADLRAV QEMLGHSSIV TTQIYTHLDR SFIKEVHKTF HPRG
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