| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1101 |
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| Symbol | |
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| ID | 3747968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1488373 |
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| End bp | 1489581 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637773632 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_379406 |
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| Protein GI | 78189068 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000119822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCC GCCTTCGCGG GAATGACAGA AATATTAAAC ATACAACTAT GAACGAAGAA
TTCATTAAAG AACTGATAAG TAAAGGTGAG ACAAGTAGTA CGCAGTTCAA GTTAAATATT
AGCAATGAGC TAAGTATTGC CCAAGAAATG GTAGCATTTG CTAACACGAA AGGTGGGAGG
ATTTTAATTG GTGTTGACGA TAAAACATGG GAGGTTATTG GTCTTACTGA TAATGATATA
AGAAGATTAA CTAATTTGCT GGTTAACGCT TCAAGTGAAC ATATAAAACC GCCTCTCTTT
ATTGAAACTG AAACGTTTAT TATAGATGAT AAGAAAATAA TTGTTGTTGT AGTGCCTGAA
GGTAGCGATA AACCTTACAA AGATAAAGAT GGCATTATTT TTTTAAAGAA TGGTGCTAAT
AAACGAAAAG TTACTAATAA CGAAGAAATA TTACGACTAT TAAGTAAAGG AAAGCATTTA
TTTGCTGATG AATTACCAGT CAATCAAGCT ACTATTGAGG ACATAAACAA AGATAAATTT
GATAAATTCT TTTTGCGTGA ATTTAATGCT GAATATGAAG CATTAGGATT AAGCTATCAA
GAAGCTTTAA AAGCAAAGAG AGTTTTAAAA GAAGGAAAAA TAACGTTAGC TGGCTTTTTG
TTTTTTGGTA AAATGCCACA AAATATTAAA CCTGCATTTT GCATCAAATG CGTTGCCTTT
TATGGTAATA GTCTTGGAGG TACCGAATAT AGAGATAGTC GAGACATTAA CGGAACAATA
CCAATCTTAT TCGATGAAGG GATGGCTTTT TTCAAACGTA ATTTATTGCA TACTCAGCAA
GGGCAAAATT TTAATTCACA AGGCATTCTT GAGATTTCTA TAATTGCATT GCAAGAGCTT
TTGGAAAATG CGCTTATCCA CAGAGATTAT ATTAAAAATT CTCCTATACG ATTGTTGGTT
TTTGATAACA GAATTGAAAT AATAAGTCCA GGATGTTTGC CTAATAGCTT GGTAGTAGAG
GAACTTCGTT ACGGTAATCC TGTCGTAAGA AATAACTTAA TGGTAAGCTA TGCCCTTCAC
ACTATGCCAT ATAGAGGATT AGGTTCCGGA TTAAAAAGAG CTTTTGAGCA GCAACCTAAT
ATTGAGCTTA TTAACGATAC TGAAGGCGAA CAATTTAAAG TTATTATTCC ACGACCAGAA
AAGAGATAA
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| Protein sequence | MDSRLRGNDR NIKHTTMNEE FIKELISKGE TSSTQFKLNI SNELSIAQEM VAFANTKGGR
ILIGVDDKTW EVIGLTDNDI RRLTNLLVNA SSEHIKPPLF IETETFIIDD KKIIVVVVPE
GSDKPYKDKD GIIFLKNGAN KRKVTNNEEI LRLLSKGKHL FADELPVNQA TIEDINKDKF
DKFFLREFNA EYEALGLSYQ EALKAKRVLK EGKITLAGFL FFGKMPQNIK PAFCIKCVAF
YGNSLGGTEY RDSRDINGTI PILFDEGMAF FKRNLLHTQQ GQNFNSQGIL EISIIALQEL
LENALIHRDY IKNSPIRLLV FDNRIEIISP GCLPNSLVVE ELRYGNPVVR NNLMVSYALH
TMPYRGLGSG LKRAFEQQPN IELINDTEGE QFKVIIPRPE KR
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