| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1097 |
|---|
| Symbol | |
|---|
| ID | 3747964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1483498 |
|---|
| End bp | 1484538 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637773628 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379402 |
|---|
| Protein GI | 78189064 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3177] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.149406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATT CAAGAGAACA GAAAATCATT GAATATCTCA AGCAAGCAGG AGCTTGTTCT
TCAAAAGAGC TTCATGAACA TATTGGTATT GCAGTAAGTT ATGCAACGCT AAAAAGAATT
TTATCAAAAC TCATAGCTGA AAATTTTCTT GTATCAGTAG GTCAAGGCAA AGGCACAAAA
TATACCATTT CTCCAATATT TGAGCTTTTA GAACCAATTG ATATTGAACG CTATTATGAA
AAAGAAGTTG ACGAAAGAGA TATAAAAGAA GGATTTAATT TCTCTTTAAT TAATGGTGTG
CTGGTAAAAT ATAATGTTTT TACAAAAGCG GAATTAGAAA AACTAAATAA GCTTCAAGCA
AAATTTGAAC ATAATATATC ACAATTAACG GCTAATGAAT ATAAAAAAGA GTTTGAACGA
TTAGCGATTG ATTTAAGTTG GAAATCTTCA CAAATTGAGG GAAACACCTA TTCTTTATTG
GAAACCGAAC GGCTTTTAAA AGAGAAGCAA ACAGCATCAG GAAAAACAAA AGAAGAAGCA
ACGATGCTGT TAAACCATAA AGATGCGTTA GATTTTATTA TTGAACATCC TGATTATTTG
TATCCATTAT CAGTTTCAAA AATTGAGGAT ATTCATACTA TTCTTACTAA AGAGCTTTCT
GTAGAACGAA ATTTAAAAAA GCGGCGTGTA GGTATTTCAG GAACAAATTA TTGCCCATTA
GATAATGAAT TTCAAATAGC GGAAGCGTTA AGAAGTTCAT GTGATGTGAT TAACGCAAAG
AGTAGTGTTT TTGAAAAGGC GTTGTTAGCG TTAGTATTGA TTTCATACAT TCAACCGTTT
ATGGATGGGA ATAAAAGAAC GGCAAGAATT GTAAGCAATG CAATTTTAAT AAACGAAAGG
CATTGCCCTT TATCGTTTAG AACTGTTGAT TCTCTTGATT ATAAAAAAGC AATGGTATTG
TTTTATGAGC AAAATAATAT CTCACATGTT AAAGAGATAT TTATTAATCA ATTTGAATTT
GCGGTTGGAA CATATTTTTA A
|
|---|
| Protein sequence | MIDSREQKII EYLKQAGACS SKELHEHIGI AVSYATLKRI LSKLIAENFL VSVGQGKGTK
YTISPIFELL EPIDIERYYE KEVDERDIKE GFNFSLINGV LVKYNVFTKA ELEKLNKLQA
KFEHNISQLT ANEYKKEFER LAIDLSWKSS QIEGNTYSLL ETERLLKEKQ TASGKTKEEA
TMLLNHKDAL DFIIEHPDYL YPLSVSKIED IHTILTKELS VERNLKKRRV GISGTNYCPL
DNEFQIAEAL RSSCDVINAK SSVFEKALLA LVLISYIQPF MDGNKRTARI VSNAILINER
HCPLSFRTVD SLDYKKAMVL FYEQNNISHV KEIFINQFEF AVGTYF
|
|---|
| |