Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1093 |
Symbol | |
ID | 3747960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1478952 |
End bp | 1480256 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637773624 |
Product | putative exonuclease |
Protein accession | YP_379398 |
Protein GI | 78189060 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.144475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTT TTCTCCACGT TGCTGATCTC CACCTTGATA GTCCGTTGAA GGGGTTGGAA GAGTACCCCG ATGCGCCGCT TAAACAATTG CGCCATGCAA CGCGCCGTGC CTTTGATAAT GTGGTGCAAA TGGCGCTTGA TGAGCGAGTG GCTTTTGTGG TTGTTGCGGG CGATTTGTAC GATACCGATT GGCGCGATTA CAACACGGGG CTTTTTTTTG TAAGCCGTAT GGCAAAGTTG CGCGAAGCGG GTATTCCTGT GATTATTGTG TCGGGCAACC ACGATGCAGC CAGCCAAATT ACCCGTTCGC TACGCCTGCC CGATAACGTA AAAATTCTCT CCCATACCCA TCCCGAATCG TATCTGCTTG AACCATACAA TGTGGCTATT CATGGGCAGA GCTTTGCCAC GCGCTTTGTG CGCGACGATC TTGCGCGTAA CTATCCGCAA GCTGATCCGT CACTTTTTAC CATTGGCTTG TTGCACACGT CGCTTGAAAC AAGCGGCGAT GTGTATGCGC CGACAACGCT TGATTTGCTG CGTTCAAAGG GGTATAACTA CTGGGCGCTT GGGCATATGC ACCGCCACGA AGTGGTGCAT CGCAATCCGT GGGTGGTTTA CACGGGCAAT ATTCAAGGGC GACATATTCG TGAGGGAGGA GCTAAGGGAT GTATGTTGGT AACGGTGGAA AATGATGCGG TGGTACAAAC CGAGTGGCGT GCGGTAGATG TGTTGCGTTG GGCACGCTGT GCGGTGTTGC TTGAGGGATG CGACTCTATG GAGCAAGTCT ATCATCTTGT GCGAGAGCGC ATGGAGGAGC TTCGCCAGCA AGCTGAAGGG CGTCCGCTTG CGCTTCGGGT GCAACTACGC GGAGCCACGC CGCTGCACCA CACGTTGCAT ACTAAAATTG GGCATGTTAT GGAGGAGATT CGGGCAATTG CGGTTAGCTT TGGTGATTGT TGGCTTGAAA AGGTGGAGTT AGAGTTGAGC GCTCCCCACG CCAAAAGCGA TCTTCTTGGC GCAGCCTCTC CTCTTGCCTC CCTGCTTGAA GCCGTTGATG CGCTGGAGCT GCCCGATGGT AGCTTAACAT CACTTCTGCC TGACTTTGAA AAGCTCCGCC ACAAACTTCC CCATGAATTA ATCAGCGATG GCGATCCTTT TGCGCCGCCA GCCGATGAAT TAGAAATATT GCGTGATGAG GTGAAGCAAC TCCTAAGCGC CACTATTGAA GAAACTATTG GGGGAACTAC TGAAAGAGCT ATAAGAGGAA GTATGGGGGG AACTATTGGA GGGAGGAACG CATGA
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Protein sequence | MFTFLHVADL HLDSPLKGLE EYPDAPLKQL RHATRRAFDN VVQMALDERV AFVVVAGDLY DTDWRDYNTG LFFVSRMAKL REAGIPVIIV SGNHDAASQI TRSLRLPDNV KILSHTHPES YLLEPYNVAI HGQSFATRFV RDDLARNYPQ ADPSLFTIGL LHTSLETSGD VYAPTTLDLL RSKGYNYWAL GHMHRHEVVH RNPWVVYTGN IQGRHIREGG AKGCMLVTVE NDAVVQTEWR AVDVLRWARC AVLLEGCDSM EQVYHLVRER MEELRQQAEG RPLALRVQLR GATPLHHTLH TKIGHVMEEI RAIAVSFGDC WLEKVELELS APHAKSDLLG AASPLASLLE AVDALELPDG SLTSLLPDFE KLRHKLPHEL ISDGDPFAPP ADELEILRDE VKQLLSATIE ETIGGTTERA IRGSMGGTIG GRNA
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