Gene Cag_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1093 
Symbol 
ID3747960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1478952 
End bp1480256 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content52% 
IMG OID637773624 
Productputative exonuclease 
Protein accessionYP_379398 
Protein GI78189060 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.144475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACTT TTCTCCACGT TGCTGATCTC CACCTTGATA GTCCGTTGAA GGGGTTGGAA 
GAGTACCCCG ATGCGCCGCT TAAACAATTG CGCCATGCAA CGCGCCGTGC CTTTGATAAT
GTGGTGCAAA TGGCGCTTGA TGAGCGAGTG GCTTTTGTGG TTGTTGCGGG CGATTTGTAC
GATACCGATT GGCGCGATTA CAACACGGGG CTTTTTTTTG TAAGCCGTAT GGCAAAGTTG
CGCGAAGCGG GTATTCCTGT GATTATTGTG TCGGGCAACC ACGATGCAGC CAGCCAAATT
ACCCGTTCGC TACGCCTGCC CGATAACGTA AAAATTCTCT CCCATACCCA TCCCGAATCG
TATCTGCTTG AACCATACAA TGTGGCTATT CATGGGCAGA GCTTTGCCAC GCGCTTTGTG
CGCGACGATC TTGCGCGTAA CTATCCGCAA GCTGATCCGT CACTTTTTAC CATTGGCTTG
TTGCACACGT CGCTTGAAAC AAGCGGCGAT GTGTATGCGC CGACAACGCT TGATTTGCTG
CGTTCAAAGG GGTATAACTA CTGGGCGCTT GGGCATATGC ACCGCCACGA AGTGGTGCAT
CGCAATCCGT GGGTGGTTTA CACGGGCAAT ATTCAAGGGC GACATATTCG TGAGGGAGGA
GCTAAGGGAT GTATGTTGGT AACGGTGGAA AATGATGCGG TGGTACAAAC CGAGTGGCGT
GCGGTAGATG TGTTGCGTTG GGCACGCTGT GCGGTGTTGC TTGAGGGATG CGACTCTATG
GAGCAAGTCT ATCATCTTGT GCGAGAGCGC ATGGAGGAGC TTCGCCAGCA AGCTGAAGGG
CGTCCGCTTG CGCTTCGGGT GCAACTACGC GGAGCCACGC CGCTGCACCA CACGTTGCAT
ACTAAAATTG GGCATGTTAT GGAGGAGATT CGGGCAATTG CGGTTAGCTT TGGTGATTGT
TGGCTTGAAA AGGTGGAGTT AGAGTTGAGC GCTCCCCACG CCAAAAGCGA TCTTCTTGGC
GCAGCCTCTC CTCTTGCCTC CCTGCTTGAA GCCGTTGATG CGCTGGAGCT GCCCGATGGT
AGCTTAACAT CACTTCTGCC TGACTTTGAA AAGCTCCGCC ACAAACTTCC CCATGAATTA
ATCAGCGATG GCGATCCTTT TGCGCCGCCA GCCGATGAAT TAGAAATATT GCGTGATGAG
GTGAAGCAAC TCCTAAGCGC CACTATTGAA GAAACTATTG GGGGAACTAC TGAAAGAGCT
ATAAGAGGAA GTATGGGGGG AACTATTGGA GGGAGGAACG CATGA
 
Protein sequence
MFTFLHVADL HLDSPLKGLE EYPDAPLKQL RHATRRAFDN VVQMALDERV AFVVVAGDLY 
DTDWRDYNTG LFFVSRMAKL REAGIPVIIV SGNHDAASQI TRSLRLPDNV KILSHTHPES
YLLEPYNVAI HGQSFATRFV RDDLARNYPQ ADPSLFTIGL LHTSLETSGD VYAPTTLDLL
RSKGYNYWAL GHMHRHEVVH RNPWVVYTGN IQGRHIREGG AKGCMLVTVE NDAVVQTEWR
AVDVLRWARC AVLLEGCDSM EQVYHLVRER MEELRQQAEG RPLALRVQLR GATPLHHTLH
TKIGHVMEEI RAIAVSFGDC WLEKVELELS APHAKSDLLG AASPLASLLE AVDALELPDG
SLTSLLPDFE KLRHKLPHEL ISDGDPFAPP ADELEILRDE VKQLLSATIE ETIGGTTERA
IRGSMGGTIG GRNA