Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1088 |
Symbol | |
ID | 3747955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1469670 |
End bp | 1470455 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637773619 |
Product | alpha/beta fold family hydrolase |
Protein accession | YP_379393 |
Protein GI | 78189055 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCACT ACAAAACCTA CCTTCATCAT AATCCTAAAG CCGCGTGGGT AGTTTTTGTG CATGGTGCGG GTGGAAGTTC CTCCATTTGG TATTTACAGA TTAAAGAGTT TATGCAGCAT TGTAATGTGC TGATGGTGGA TTTGCGTGGT CATGGGCGCT CAAAAGATAT GGGAATACCA GAGGGGATGC GCCGCTACGA TTTTAATTGT GTAACGCGCG ATATTATAGA GGTGCTTGAT TTTTTACGTA TTGAAAAGGC ACACTTTATT GGCATTTCGC TTGGTACGAT TCTAATTCGC AATATTTGCG AATTAGCGCC TGAGCGCGTG GCTTCTATGA TTATGGGGGG AGCAATTATT CGTCTTAATC TTCGCTCTAC GGTGTTGGTA ACGCTTGGCA ATACTTTTAA GCACGTTATG CCCTATATGT GGCTTTACCG CTTTTTTGCA TGGATTATTA TGCCTCGTGC GCGCCATAAA AAAGCGCGCA ACTTATTTGT GAATGAGGCA AAAAAGGTGG AACAAAAAGA GTTTTTGCGC TGGTTTAGTT TAACCTACGA TTTAACGCCG CTGTTACGAT ATTTTGAAGA AAAGGATGCG GCAACTCCAA CGCTCTACTT AATGGGTGAT GAAGATCACA TGTTTTTGCC TTTTGCTAAA CGCATTGTTA CACGCCACAC CTATGCCACG TTGGAAGTAA TTGCTAATTC AGGGCATGTG TGCAATGTGG ATCAAGCTCG TGAGTTTAAC CAACGAGCAA TTCGCTTTAT TAAGCTGCAT AGTTAA
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Protein sequence | MLHYKTYLHH NPKAAWVVFV HGAGGSSSIW YLQIKEFMQH CNVLMVDLRG HGRSKDMGIP EGMRRYDFNC VTRDIIEVLD FLRIEKAHFI GISLGTILIR NICELAPERV ASMIMGGAII RLNLRSTVLV TLGNTFKHVM PYMWLYRFFA WIIMPRARHK KARNLFVNEA KKVEQKEFLR WFSLTYDLTP LLRYFEEKDA ATPTLYLMGD EDHMFLPFAK RIVTRHTYAT LEVIANSGHV CNVDQAREFN QRAIRFIKLH S
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