Gene Cag_1048 details

Gene Information

• Locus tag: Cag_1048
• ID: 3747029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 1417669
• End bp: 1421049
• Gene Length: 3381 bp
• Protein Length: 1126 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637773577
• Product: hypothetical protein
• Protein accession: YP_379353
• Protein GI: 78189015

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00227105
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCACAT GGGGCTCAAA TCATGGTAGC AATATCTATG GTCAGATATT CAAGAATGAT 
GGGTCAAAAG AGGGTAATCA ATTTCAGATT AACACTTATA CCTCTCAGCA ACCCGACTGG 
AACCCATTTG AAAAATATGC TCCCTCGATG GCTGCCTTAG CTAACGGCGG TTTCGTGGTA 
ACATGGAATA ACTATTGGCA GGATGGCGAT GGATCCGGTA TCTATGCAAG AATTTACGAT 
AACAGTCCCA GCACTGGCTT GTTGAGTCTT GACTTACTTG ATACAAATTG GAGTAATGAT 
AGTGATAATA TTTATAGAGC AACAGGGCGT GCCACATTGG GACTTTTGTC AGGCAATAGT 
AGTATGCTGT ACATCCAAGA TGCTCAATAT ACGCTTACTG GTAATGCTCT GATTATTGAA 
GGTGAATTCA GTGCAATTAT TGAAGGAACT ACTCGGTCAC TCTTTATCGG CAAAGCTGTT 
TTTGATGTTA CAACAGGTTT TGCTGAACTT ACTGTTGGTA GTAACCTTCA TAATCCAGCA 
GGATTGGGTT TTGAATTTAC CGCTCTTGAT CTCAGCAACA ACTATATTGA TATACATTTT 
TCACCATTGG AATTACCAGC AGGAATCAGT AATACCAATA TCATTTTAGG CTCTGACTCA 
TTTGTTATCA AGGAAAACTA TCCTCAACTT GGTTTTTATG GTAGCGTAAA TTTTCCTGAT 
AAGACATTTG AACTTTTTGA TATGCTTACT GTTCATGCTT ATGACTGGTC AGTGAGTTAT 
GACAGCCCCG ATAATGAATT GCATATACTT GGAGGCTTTG AGTTACAAAC CGGATGGGAT 
AATGTTCCCG GTATCAATGC AGAACTGACG GGCGATGGTT TAGTTATTCG CAATGGTGAA 
TTTGCTGATG TTGCTCTTAC AATCACCCTT GATGATTTCT CCGTCAAAGG CTGGGGATTC 
AATAATGTTA GTGTTACCCT TGATACAGAG AAAAATTCCA TTGTTGGCTC GGCTGGTATA 
AAGCTACCTA TGTTCGCCTC TTCTCTTGAA ACCACCATCG GATTTATCGT TAATCCTTTT 
GAGCTTGACA CAGCCCTTTT TCATATCCCG TTTATCAACC CGGGTATCGC CCTTGGTACA 
ACAGGATGGT TTCTAACTGC TATTGAAGGA GGTGTTTCTA ATCTGGCAAG TAGCAATAAG 
GAACCGTTAC TATTTAAAGG CGGAGTAGAG CTACAGCTTC CTGAAGTTAT GGATTTGAGT 
GTGAACGGTG AGCTGGATAG CAAACATATT GCAGGATTCG TAGAAGGAAC AATAATAGAT 
AAAGATGCTA TAGATTTTCA AGGGCAAGTT ACCCTTAATT GGAACAAAGA TTATGTGCGA 
GTGAACGGTT CGGCATCCTT TGCACAAGGA ATGATTGTCG GAGATTTTGG TTTTACAAGC 
AACTTGAATC TTGATTTTAC AGCTAAAGGC AGTGCAACGG TAAAATTTGA TACAATTGAT 
CAAATCCTTT CAGGCCATTA CTATCTTAAT TACAGCAATG ATCATAAAGA TAGTAATGAT 
TATATAGCTG CATGGGCAGA GACTGTATTG CATATCCCAG TTTTTGGAGA CAAAACGGTA 
ACTATAGGAA CCAAGTATTC CTTTGATGGA ACATGGAGAG CTTTCGGGGC AGCAGAGGTT 
CCACTCTACA GCAGTTGGAT TGTTGATGAA ACGATAAGTG ATTTAATGGT TACAGTGAAT 
TGGGATAATC CTGTAAACGA CGTTGAAACA CGAGTAGTAG TTTATGATGA TTTGGAGAAA 
ACCAAAATCC GCCAAATTAT TAGCGAAGCG GAATATGGAG AACATGATAT TGCCATCATC 
AGCGAATGGA GCGGTAGTAC AGCTAAAGTG ATTTATATCA ATACCCCAGA AGCAGGCTTG 
TGGGATGTTG AGGTTATCAA CTCTGATGGA CTTGGTGAAG TAGTTTACAG CGCAACAACA 
AGCCTTAAAC CGCTTGTTCT TACAGTGGGT GAACTTAATC TGAATAACGA TCAGCTCAGT 
CTAAGCTATA TCGCGAATAC CCCTGAAACC GATGGCGTTA TATCTTTCTA CTTAGATGAC 
AACGACAATG GTTTTGATGG TCAGATGATA GAGAGTATGG CTGATCCTGA TGGAAATGGG 
CAATGGGTGT GGAATACCAC TGGATTTCAT GGCGGCACAT ACTGGCTCTA TGCAACGTTA 
GCAGATGGAA AAAGTGCGCC GGTAATGTCG TATGCAGCAC AATCCATTTT TATTAATAAT 
GCTCCAGTTG CGCTTGATGA TTCAATAATC ACAAATGAAG ACACCGCAGT TGTTATTGAT 
GTTTTAGTGA ACGATAGCGA TTTTGATGAC AACCCGTTGC GCATAAGCAG CATTACTACT 
CCATCCAACG GTACGGTTAG CGTTACTGAT GACAATAAAA TCCTTTTCGC TCCTTATGCT 
GATACGTATG GTGAATCCAT ATTCACTTAC ACTATTACTG ATGGTTACGG TGGAGAAAGT 
ACGGCAGTTG TAAATATTAC TATCAATAGT ATGCCTGATG CTCCGAAAGG GTCGGTGATT 
ATTGAAGGGC ATCTCAAACA AGGTGAAATA CTGAGAGCTG ACGTGAGTAC TCTTAGTGAT 
TCGGATGGTA TGGGAACCAT TGCTTACCAA TGGAAAGTTG ATGGCACCAA TATTGAAGGA 
GCAACAAATG AAACATACAC CCTGACGGCA GCGGAGGTGG GCAACATTGT TACTGTTGAG 
GTGAGCTATA CCGATGGCAA TGGCAAGCTG GAAAGCGTAG CAAGTTTAGC AACCAATGCG 
GTTACACCTA TTAACGCCCC CAATCATCAC GACCTCGACG GCACCATCAC CTTCTGGCAA 
ACTGGCGACG CACTTGCTGA CGTAGCCACT ACGCTCACAC AACCCAACAA CGGTGCCGCT 
ACCGCCACCA CCGATGTCCA TGGATACTAC CAAATCCCCG ATGTGCAATC CGGCACCTAC 
CAACTCAGCG CCATAAAAGC CACCGATACA GCAACAACAA ACGCCGTTAC AACCGATGAT 
GTTCATGCAG TTTTAAAAAT AGCCGCAGGA ATTAATCCAA ATCCAGACGG CAGCGCTGTT 
TCACCCTATC AATTCCTTGC CGCCGACATA AACCACGATG GCAAAGTACG CGCCGCCGAT 
GCCCTTCTGC TTCTAAAAAT GATCGTTGAC TACGAAGGCG CACCAGAACC ACAATGGTAC 
TTTGCACCAT ACAACATTGG TAACGAAGCC ACCATGGATC GCTCACATGT TGATTGGTCA 
GTTACTAATC CACAAACCGT TACCATTAAC GACAACACAA CAGTAAATCT TATCGGCATT 
CTAACCGGGG ATGTGGTGTG A 

 

Protein sequence

MVTWGSNHGS NIYGQIFKND GSKEGNQFQI NTYTSQQPDW NPFEKYAPSM AALANGGFVV 
TWNNYWQDGD GSGIYARIYD NSPSTGLLSL DLLDTNWSND SDNIYRATGR ATLGLLSGNS 
SMLYIQDAQY TLTGNALIIE GEFSAIIEGT TRSLFIGKAV FDVTTGFAEL TVGSNLHNPA 
GLGFEFTALD LSNNYIDIHF SPLELPAGIS NTNIILGSDS FVIKENYPQL GFYGSVNFPD 
KTFELFDMLT VHAYDWSVSY DSPDNELHIL GGFELQTGWD NVPGINAELT GDGLVIRNGE 
FADVALTITL DDFSVKGWGF NNVSVTLDTE KNSIVGSAGI KLPMFASSLE TTIGFIVNPF 
ELDTALFHIP FINPGIALGT TGWFLTAIEG GVSNLASSNK EPLLFKGGVE LQLPEVMDLS 
VNGELDSKHI AGFVEGTIID KDAIDFQGQV TLNWNKDYVR VNGSASFAQG MIVGDFGFTS 
NLNLDFTAKG SATVKFDTID QILSGHYYLN YSNDHKDSND YIAAWAETVL HIPVFGDKTV 
TIGTKYSFDG TWRAFGAAEV PLYSSWIVDE TISDLMVTVN WDNPVNDVET RVVVYDDLEK 
TKIRQIISEA EYGEHDIAII SEWSGSTAKV IYINTPEAGL WDVEVINSDG LGEVVYSATT 
SLKPLVLTVG ELNLNNDQLS LSYIANTPET DGVISFYLDD NDNGFDGQMI ESMADPDGNG 
QWVWNTTGFH GGTYWLYATL ADGKSAPVMS YAAQSIFINN APVALDDSII TNEDTAVVID 
VLVNDSDFDD NPLRISSITT PSNGTVSVTD DNKILFAPYA DTYGESIFTY TITDGYGGES 
TAVVNITINS MPDAPKGSVI IEGHLKQGEI LRADVSTLSD SDGMGTIAYQ WKVDGTNIEG 
ATNETYTLTA AEVGNIVTVE VSYTDGNGKL ESVASLATNA VTPINAPNHH DLDGTITFWQ 
TGDALADVAT TLTQPNNGAA TATTDVHGYY QIPDVQSGTY QLSAIKATDT ATTNAVTTDD 
VHAVLKIAAG INPNPDGSAV SPYQFLAADI NHDGKVRAAD ALLLLKMIVD YEGAPEPQWY 
FAPYNIGNEA TMDRSHVDWS VTNPQTVTIN DNTTVNLIGI LTGDVV