| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1031 |
|---|
| Symbol | |
|---|
| ID | 3747759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1400864 |
|---|
| End bp | 1401700 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637773560 |
|---|
| Product | hydrogenase, iron-sulfur binding protein, putative |
|---|
| Protein accession | YP_379336 |
|---|
| Protein GI | 78188998 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATGA GCATACAAGA AGAGTATAAA AACAAAGCCA AAGAACTCCT TAGCAACGGT
ACGGTTAAAA TGGTAATTGG CTACAAAGCT GGTACCACTG CAAACCGTCG CCGCCCACAT
TTTATGCGCA CCCCCGAAGA GTGCGACACC ATGCTGCTCG ATAGCAACTG CATTGCCAAT
TTATCGGGCT ATTTGCTTAC CGAAGGGTTG CTTAGTGATG AAAAAAAGGT TGCCATTTTC
CTAAAGCCTG ATGGCATTCG CTCCATTAAT ATTCTGGCGG CTGAAGCCCA ATTGCAAAGC
CCGCAAGTGG TCATTTTTGG CTTTGATATT CAAGGAAATG ATGTTGTGGA AGTAAAAGGG
CACAGCGTTG CCGATTTTGG TTCGCTGATG GCAGCCACCA AAGAGAAGGC TCCCACCTCT
TTGCAAGAAC CCACAATTGA AGCCTTGCAA AGCAAAAATG CGGTTGAACG TTTTTCATTT
TGGAAAAAAG AGTTTGAACG CTGCATTAAA TGCTACGCCT GCCGCCAAGC CTGCCCCATG
TGCTATTGCC GCCGCTGCGT GGTGGACAAC AATCAACCGC AATGGGTAAA CACCTCTTCG
CACACGCTTG GTAATTTTGA GTGGAACTTA GTACGAGCCT TCCATCTTGC AGGACGCTGT
GTTGGCTGCG GCAATTGCGA CCGAGCATGT CCTGTAAACA TCCCCTTACG ATTGCTTAAT
ACCCGAATGG CACAAGAGGT GCTTAACGCC TTTGACCACG TTGCAGGCAT GAGCGACACA
CAACCTCCCG TGCTCGCAAG CTTTAAAAAA GATGATTCTG AGACCTTCAT TCTCTAA
|
|---|
| Protein sequence | MAMSIQEEYK NKAKELLSNG TVKMVIGYKA GTTANRRRPH FMRTPEECDT MLLDSNCIAN
LSGYLLTEGL LSDEKKVAIF LKPDGIRSIN ILAAEAQLQS PQVVIFGFDI QGNDVVEVKG
HSVADFGSLM AATKEKAPTS LQEPTIEALQ SKNAVERFSF WKKEFERCIK CYACRQACPM
CYCRRCVVDN NQPQWVNTSS HTLGNFEWNL VRAFHLAGRC VGCGNCDRAC PVNIPLRLLN
TRMAQEVLNA FDHVAGMSDT QPPVLASFKK DDSETFIL
|
|---|
| |