| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1017 |
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| Symbol | |
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| ID | 3746745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1361039 |
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| End bp | 1361977 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637773546 |
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| Product | HhH-GPD |
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| Protein accession | YP_379322 |
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| Protein GI | 78188984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | [TIGR00588] 8-oxoguanine DNA-glycosylase (ogg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0765881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAG AATTTTTAAT AACACATAAT AAAGAGTTAG AAATCGAAAA ATCTCTCTTT
AGTGGTCAAT CTTTTCTCTG GAAAAAGCAT CAGAGTAATC TTGATTCTTT TGTTACTGTA
ATGGATAAGA GATTGGTTAT TATAAGCCAA CTATCTCCTT ATACCATAAG GGTTCATTGC
GATAGTGAGG TGCTTTATGG GCAAAAAATT TCAGCTTTTA TAAGCCACTA CTTTACGCTT
GATGTCCCCT TTCAAAAGAT TTTTTCATCC TCATTTAAAA GTAACTACTC GGAGGTATGG
CGCTTATTAG ATGGGTATAA ATCCATCGCA CTGTTACGGC AGCATCCGTT TGAAACCCTT
ATCTCATTTA TGTGTGCTCA AGGGATTGGT ATGCGATTAA TTCGCCAGCA AATCAATCGT
TTATGTGAAC GGTATGGAGA GTTTTATGAG GCAGAAATGG AGGGTGAAAT GTTGTGCTTT
TCGGGCTTTC CTGCGCCCGA GCAACTTGCT TGCTTGAACG CTGAGGAGCT GAGTTACTGT
ACCAATAACA ATCGTGAAAG AGCGGCAAAC ATTATTGCGG TTGCGCGTAA GGTTGTGGAA
GGTAGATTAG ATTTGTCGAG TTTGTCATAT CCAAACATGG CGTTTGAGGA GGTGCAAGCT
CGCTTGACGC AAGAGCGTGG CATTGGGTTA AAAATTGCCG ATTGCGTTGC TTTGTTTGGT
TTGGGATATT TTGAGGCATT CCCTATTGAT ACGCATGTGC ATCAATTTAT GGCTCAGTGG
TTTAAAGTGC CTGCTGCCTC GCGTTCACTA ACCCCCGCCA CCTATCGGCA GTTAACCCTC
GAAGCGCGTG AAATTCTTGG CAGCCATTAT ACGGGCTATG CAGCGCACCT GCTTTTTCAT
TGTTGGCGTT GTGAGGTTAA AAAGCTTTGC TGGTTTTAA
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| Protein sequence | MLKEFLITHN KELEIEKSLF SGQSFLWKKH QSNLDSFVTV MDKRLVIISQ LSPYTIRVHC
DSEVLYGQKI SAFISHYFTL DVPFQKIFSS SFKSNYSEVW RLLDGYKSIA LLRQHPFETL
ISFMCAQGIG MRLIRQQINR LCERYGEFYE AEMEGEMLCF SGFPAPEQLA CLNAEELSYC
TNNNRERAAN IIAVARKVVE GRLDLSSLSY PNMAFEEVQA RLTQERGIGL KIADCVALFG
LGYFEAFPID THVHQFMAQW FKVPAASRSL TPATYRQLTL EAREILGSHY TGYAAHLLFH
CWRCEVKKLC WF
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