| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1012 |
|---|
| Symbol | |
|---|
| ID | 3746740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1353577 |
|---|
| End bp | 1355097 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637773541 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_379317 |
|---|
| Protein GI | 78188979 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACGC CCACTAAAAC CTATCGTTCG CTTGCAATTC TTGGCACCGC TTCGGATGTG
GGCAAAAGCA TTGTAGCTAC GGCGCTCTGC CGCATTTTTC GTAATGCGGG GATTGATGTT
GCGCCGTACA AAGCGCAAAA TATGTCGAAC AATTCAGGCG TTACGCCCGA TGGTTTGGAA
ATTGGGCGGG CGCAAATTGC TCAGGCGGAG GCGGCGTGCG TGGTTCCTAC GGCTGATATG
AATCCCGTGT TGCTCAAGCC GAACACCGAT ATTGGAGCGC AGGTTGTGCT GCAAGGCAGA
GTGTGCTCTA ACGAGAGCGC CCAAGGCTAT TTTCGCGACA CCTCGCGTTG GGCAGAAGCC
GCGCGTGAAA GTCTGCTTCG GCTCAAGCAA AAGCATGAGT TGTTGGTGAT TGAAGGGGCT
GGCTCGTGTG CTGAAATGAA TTTGTACCCG CGCGATTTTG TGAACTTCCG TACCGCGCGT
GAAGCGGACG CTGCCGTTAT TCTTGTTGCC GATATTGATC GTGGCGGCGT TTTTGCGCAA
GTGGTGGGAA CGCTTGCCGT TATTCCGCCC GAAGATCGAG CGCTTGTTAA AGGGGTGATT
ATTAACCGTT TTCGGGGCGA TAGCGAGCTC TTTCGCGAAG GCATAACCAT GCTTGAGGAG
ATGAGTGGCG TACCCGTGTT GGGCGTTATT CCTTACTTCC GCCATTTTGC CATTGATGCC
GAAGATGCCG TGCCGCTCTC CGCAAAAGTT GATCCTGCTC AAGAACCCGA AACGGGCAAA
GTTGGCGTGG CAGCCATTTA CTTTCCCCAC ATTTCAAACT TTACCGACCT TTCGCCGCTT
GAGCACGATC CATCAGTTAC GTTACACTAT CTCCACCATC CAAAACCGCT AAGCGCTTAC
AAGGTGCTAA TTTTGCCCGG CTCAAAAAAT GTACGGGGCG ACTATGCGTG GCTTCAGCAA
ATGGGGTGGG AAAAAGAGAT TCGTGCTTTT CGTGAAGCGG GTGGATTGGT GATTGGCATT
TGCGGCGGTT ACCAAATGCT TGGGTGTTCA ATTGCCGATC CTTACGGTGT GGAAGGGGAG
TCGGGCACAA CGCAAACACT TGGATTGTTA GAGACTGAAA CCCTGCTTGA GCAAGAAAAA
TATCTTGCCA ATAGCGAAGG CGTGTTGGTT GGCACCTCCA TTAAAGCCTT TGGGTATGAA
ATTCATAATG GACGCACCAC CGTTGGCGCC AATTGTCATC CACTGATGAA TATTGTTGCT
CGCAACAACC ATCCCGAAAG CGATGTTGAT GGCGTTGTAA GCGCTGATGG TCGAGTTATT
GGCACCTACT TCCACGGCAT TTTTAATGAA CCTGCCGTCA AGCAATGGTT CCTTCAACAA
GCCGATTCCA CCTACACATT GCAGCCGCAT GAACGTGGGC GGCAGGAGAG TTACGAGTTG
TTAGCCGATC ACTTTCGGCA ACATCTTGAT GTAAATAAAC TTTTTGAATT GATAGACTAT
GAACAATCTC TTTTGCCATA A
|
|---|
| Protein sequence | MVTPTKTYRS LAILGTASDV GKSIVATALC RIFRNAGIDV APYKAQNMSN NSGVTPDGLE
IGRAQIAQAE AACVVPTADM NPVLLKPNTD IGAQVVLQGR VCSNESAQGY FRDTSRWAEA
ARESLLRLKQ KHELLVIEGA GSCAEMNLYP RDFVNFRTAR EADAAVILVA DIDRGGVFAQ
VVGTLAVIPP EDRALVKGVI INRFRGDSEL FREGITMLEE MSGVPVLGVI PYFRHFAIDA
EDAVPLSAKV DPAQEPETGK VGVAAIYFPH ISNFTDLSPL EHDPSVTLHY LHHPKPLSAY
KVLILPGSKN VRGDYAWLQQ MGWEKEIRAF REAGGLVIGI CGGYQMLGCS IADPYGVEGE
SGTTQTLGLL ETETLLEQEK YLANSEGVLV GTSIKAFGYE IHNGRTTVGA NCHPLMNIVA
RNNHPESDVD GVVSADGRVI GTYFHGIFNE PAVKQWFLQQ ADSTYTLQPH ERGRQESYEL
LADHFRQHLD VNKLFELIDY EQSLLP
|
|---|
| |