Gene Cag_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1006 
Symbol 
ID3747753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand- 
Start bp1345334 
End bp1345981 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content46% 
IMG OID637773535 
Producthypothetical protein 
Protein accessionYP_379311 
Protein GI78188973 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0356084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCCG AATCCGACTT TATAGCAATC TCAGCCCTGC AACACTTTGC CTTTTGCCCT 
CGGCAGTGTG CCCTTATCCA TCTTGAACAA ATATGGAGTG AAAACATGTA CACTGCCGAA 
GGTAGAGAGC TGCACGAGCG GGTAGATGAA GGCAAAACTT CCTATAAAAG CGGTGTACGT 
ATTACACGCA GCGAACCCTT ACGAAATGCG ACATTAGGCA TTGCCGGTGT TGCCGATGTA 
ATAGAATGGC ATAAGCAACC AAATGGAAAA GAGCTTCCCT TTCCCGTTGA ATACAAACGA 
GGCAAACCAA AAAAGCATAA TGCCGACAAA ATTCAGCTTT GTGCTCAAGC ACTCTGTCTC 
GAAGAGATGC TTGGCATTCA CATTCCATCA GGCGCACTCT TTTATGGTGA AACAATGCAC 
CGACTTGAGG TAGAATTTAC CCCTCCATTG CGAGAACAAA CAAGAGGGGC AGCAGAAGGA 
ATCCATGAAT TATTTGAACG AGGCTTAACC CCACCACCCG ATTACAGCGC AAAATGCAAA 
CAATGTTCGT TGCTTGAGGT TTGCCAACCA AATCTTTTAG CACAACACAA CACAGCAAGA 
AATTACCTTG CCTCACTTGT GCAAACGCTA TCAGCGGAGG ATGCGTGA
 
Protein sequence
MYPESDFIAI SALQHFAFCP RQCALIHLEQ IWSENMYTAE GRELHERVDE GKTSYKSGVR 
ITRSEPLRNA TLGIAGVADV IEWHKQPNGK ELPFPVEYKR GKPKKHNADK IQLCAQALCL 
EEMLGIHIPS GALFYGETMH RLEVEFTPPL REQTRGAAEG IHELFERGLT PPPDYSAKCK 
QCSLLEVCQP NLLAQHNTAR NYLASLVQTL SAEDA