Gene Cag_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1004 
Symbol 
ID3747751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp1343970 
End bp1344260 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content39% 
IMG OID637773533 
Producthypothetical protein 
Protein accessionYP_379309 
Protein GI78188971 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000128367 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTAT TAGTAACCTA TGATGTAAAT ACCGAATCAC CTGATGGTAA ACGAAGGCTA 
CGGCGCATTG CGAAAACTTG CCAAAATTAT GGGCAACGGG TACAGTTTTC TGTATTTGAA
TGTAATGTTG ATCCTGCACA ATGGACGAAA CTAAGAGCAA AGTTATTACG TGAAATGGAT
CCAAATCGAG ATAGCTTACG CTTTTACTTT CTTGGCTCAA ATTGGCAAAA TCATATTGAG
CATGAGGGAG CTAAAGAGCC GAGAGACCTT GAAGGAGTGT TAATTTTATA A
 
Protein sequence
MMVLVTYDVN TESPDGKRRL RRIAKTCQNY GQRVQFSVFE CNVDPAQWTK LRAKLLREMD 
PNRDSLRFYF LGSNWQNHIE HEGAKEPRDL EGVLIL