Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0988 |
Symbol | |
ID | 3747736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1333586 |
End bp | 1334287 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637773518 |
Product | ATPase |
Protein accession | YP_379294 |
Protein GI | 78188956 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.663944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCA CAAGTGCAGC AACGCCCGTG ATTGCCATGC GCGAGCTTTG CAAATACTAT GTAATGGGCG ATGAAACCGT GCGTGCGTTG GACGGCATTA CGCTTGAGTT CAAGCACAAC GATTACGCGG CAATTATGGG ACCTTCGGGC AGCGGCAAGT CAACGCTGAT GAATATTCTC GGCTGCCTTG ATTCTCCCAC AAGCGGCACC TACGAGCTGA ATGGCGAACA AGTTGCCGAC ATGGACGACG ACGAGTTAGC CCGCATTCGC AACCGTGATA TTGGCTTTGT ATTTCAAACC TTTAATTTGC TGCCTCGCTT GAACTGCTTG CGTAACGTTG AGCTACCTCT TATTTATGCA GGCGTGCCAC CCGAAGAGCG CGAAGCACGA GCTGTGGCAG CGTTGCAACA AGTGGGATTG GCAGAACGCA TTCGCCACAA GCCATCGGAG CTATCGGGAG GGCAAATTCA GCGCGTTGCT ATTGCACGAG CATTAGTAAA CAAGCCAGCA ATTATTCTTG CCGATGAGCC AACGGGTAAT CTCGACACTG CCACCAGCCA CGACATTATG AGAATGTTTA GCAAGCTTTC TGAGGAGGGC AACACCATTA TTTTAATTAC GCACGAAGAA GATATTGCCC GCTGTACTCA GCGCCTTATC CGTTTGCGTG ATGGTAAAAT TGAGAGTGAT GTAAGGGGAT AA
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Protein sequence | MSATSAATPV IAMRELCKYY VMGDETVRAL DGITLEFKHN DYAAIMGPSG SGKSTLMNIL GCLDSPTSGT YELNGEQVAD MDDDELARIR NRDIGFVFQT FNLLPRLNCL RNVELPLIYA GVPPEEREAR AVAALQQVGL AERIRHKPSE LSGGQIQRVA IARALVNKPA IILADEPTGN LDTATSHDIM RMFSKLSEEG NTIILITHEE DIARCTQRLI RLRDGKIESD VRG
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