| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0979 |
|---|
| Symbol | |
|---|
| ID | 3746904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1317496 |
|---|
| End bp | 1318221 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637773509 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_379285 |
|---|
| Protein GI | 78188947 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.103912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATAA CCATGCTTGA TGCACAACAG CTCAGCAAAA GCTACACGCT TGCAGGAAAA
CGTACCATCA ATATTTTGCA AGGGGTAACT CTTCGCGTCC ATGAAGGCGA AATGGTAACC
ATTGTTGGAG CGTCGGGCAG TGGAAAAACC ACTTTGCTGA ACTTGCTTGG CACGCTCGAT
ACGCCCGATA GTGGCACCAT TGTTTTTAAC AACCAACCTC TTTTTCAAAA CAACCGCTAT
ACTCTTTCAC GCAAAGCACT TGCGGCATTT CGCAATCGCC AAATTGGCTT TGTTTTTCAA
TTTCATCACC TGCTTTCCGA CTTTACGGCG CTTGAAAATG TTGCTATGGC AGAATTTATT
GCAACGGGCA ACTTGCAAGC CGCAAAAGTA CGCGCAGCCG AACTTCTTAC AAACTTCGGT
TTATCTGAAC GCCTCGACCA TCTTCCCTCT GAGCTATCGG GTGGTGAACA ACAGCGCGTT
GCTATTGCTC GTGCTCTTAT GAATAATCCC AAGCTTGTAC TTGCCGACGA ACCCAGCGGT
AACTTAGATC AACGCAATAG TCAACTGCTG TACGAGCTTA TGGCACGTAT TAGCAAAGAG
CAGCGCACGG CTTTTATTAT TGTAACGCAT AATTATGATT ATGCAGCAAT GGCTGATCGT
TGCTTTTGTA TGGAAAATGG ATTATTGGGT GAGTACAAAA GCTATGAAAA AAGCACTGCT
GTTTGA
|
|---|
| Protein sequence | MIITMLDAQQ LSKSYTLAGK RTINILQGVT LRVHEGEMVT IVGASGSGKT TLLNLLGTLD
TPDSGTIVFN NQPLFQNNRY TLSRKALAAF RNRQIGFVFQ FHHLLSDFTA LENVAMAEFI
ATGNLQAAKV RAAELLTNFG LSERLDHLPS ELSGGEQQRV AIARALMNNP KLVLADEPSG
NLDQRNSQLL YELMARISKE QRTAFIIVTH NYDYAAMADR CFCMENGLLG EYKSYEKSTA
V
|
|---|
| |