| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0954 |
|---|
| Symbol | |
|---|
| ID | 3746529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1291484 |
|---|
| End bp | 1294267 |
|---|
| Gene Length | 2784 bp |
|---|
| Protein Length | 927 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637773484 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_379260 |
|---|
| Protein GI | 78188922 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.323124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAA AAATTACTCG GCGCGATTTC TTAAAGGTTG CTTCCCTACT TGGTGGAGCA
ACGTTGTTAC GTCCCTTATG GGGCAGCAAT AGTGCAGTGC CACAGGGTGG TGCTAATGCC
GTTGCAAGCC AAGTGGCACA CGCTAATACG TGGGTTCCAA GCATTTGCAA TTTTTGCTCA
TCCTTCTGCA ACATTATGGT TGCAACCGAG GAAAGCGAAG GCGTTAAACG CATTGTGAAA
ATTGAGGGCA ATGCCAATAG CCCGCTCAAT CGTGGCAAAA TTTGTGCGCG TGGGCAGGCT
GGTTTGCGCC AAACCTACGA TCCCGACCGT TTAAAGCAGC CGCTTATTCG TGTGCAAGGC
AGTAAACGTG GCGAGTGGCG CTTTCGTGCG GCAACGTGGG ACGAGGCATA CAACTACATT
GCTGCAAAGT TAATGAAGGT GAACCCGTGG GAAATTGCAA TGGTTGGCGG TTGGACGGCG
TGTGTTTCTT ACATGCACTT TAGCTTACCC TTTACCCGCA CGCTGCAAAT TCCCAATATT
ATTGCCTCTC CCTTGCAACA TTGCGTTACC GCAGGGCACC TTGGCACCGA TTTGGTAACG
GGCAATTTTA ACGTGCACGA TGAAATTCTT GCCGATTTTG AGCACGCTCG TTACATCCTT
TTTAGCATGA ACAACGCCTC GGTGGCGGCA ATTTCAACAG CGCGTGCCGT GCGTTTTGGC
GAAGCAAAGA AAAATGGGGC AAAAGTAGTC TGCCTTGATC CTCGCATGAG TGAGCTTGCT
TCAAAAGCTG ATGAGTGGAT TCCTATTAAA CCGGGCACTG ATCACGCCTT CTTTCTTGCT
TTCTTGCATT TGCTTTTGCG CGAAAAGTTG TACGACGAAA CTTTTGTACA AAAACATACC
AACGCCCCCT TTCTTGCTTG GAAAGATGAA CAAGGGTTGG TGCATCTTGC GGGCGAAAGC
AGCAATGGTA AGCCGAGTAG CTATACGCTT TTCGACCTCA ATAGCCAACG AGTTGTAACC
GTTGCAGGGC ACACCAATAG CAACGAACGC TCAAGCGGTG GCGCTCGTTT GCTTCCAGCC
CTTCATGCGC CTGAAGGTAC GGTGTGGAAT GGACACTCCG TTAAAACGGT TTTTGACTTT
TTTATAGAAG AATCAGCCAC CTTTACCCCT GAATGGGCAG CCGCCATTAC CGATGTTCCT
GCAACCACCA TTCGTCGTAT TGCAAGGGAG TTTGGGCAAG CTCGTCCCGC GTTGGTTGAC
CCTGGGTGGA TGGGGGCGCG TTACCATCAC GTTATTGGGC AGCGCCGCTT GCAAGCCATT
ATTCAAACCT TAGTTGGCGG CATTGATGTA CCGGGTGGAT GGTTAATGAG TGGAGAATAT
CACCACAAAG CAGAAAAAAT GGCGCATGGT AGCCATAGCG GTGATGTGCC TCCAGTGGAG
AAGCCCGGCA TGGGTTTTGC CTTTGGTTTG CTTGATATTT TTGGGAACCC TGCAGCATGG
GAACATGGCA AGCCTGCCGT ATCGTTTGCA TGGGCAATGG AGCAGCAAAA ACAAGGCAAG
CCCTCCGTCT TTATTCCTGC CATGGCTGAT GTGGGATTGC TTGAATCGGT GAAAGGTGAG
TTGCAATTCA ATGGCGAACC CTATATGACG AAGGCATTTA TTATGAATGC TGCTAACCCA
ATTCGCCATT ACTTCCCTGC AAGTCGTTGG AAGGAGATGC TTTCGCATGA AAATGTAGAA
CTTGTGGTAG CTATTGATGT GCTTCCCTCC GACACCACGT TATATGCTGA TGTAATTCTT
CCAAACCACA CCTACCTTGA ACGCAATGAG CCGCTACTCT ATCCGTTAGG ACCCAGCACC
GATTTAGGAT ACACCACGCG CTTACGTTCT ATTAAGCCGC TTTATAACAG TCGCGATACA
GCCGATATCT TGTGCGAAAT TGCACGACGT ATGGGCAAGC TTGAGCCATT CCTTGATGGT
GTTGCTGAAT ATGCGGGGCT TGATAAAGCG ATGTTGCAGA GTGAAATCAA TACCGCGACA
CAAGCAGGTA CACCATTAAA CGATGCTTTC TTAAAAACCG CATATGCTGC CATGAGCACC
TTTGCGGAAC AGGTAAACGG TACTCCAATC AGCGCCCAAG AGGTAGAAGC AACCATTCGC
ACCAAAGGAA TGCTGTTACT GAAAAGCGCC GATGCAGTAT TAGAAGAGAG TGCTATGCCC
GGTAAACTTG CCCTGCCAAC CATGTCGGGG CGATTGGAGT TGTTTAGCCC CATTCTCGCC
TCGTTTGCGC AAGCCGCAGG AATGCAACCA ATCTTTAATC CCGTACTTGG CTACGTGCCC
CGCATGATGC AGCAAAGTGG CGATAAAACC ACCCTTTCAA GCAACGAATT TTATTTCACC
TACGGAAAAA CGCCCCTTGT TTCGCACGCA TCAACCAACA CCAATAATAC CTTGCTTGTT
TCAATTACTG CACAAAAAGA GGGTGCATTG CGTGGACTGT GGATGAATAG CCGTAAAGCT
ACGGCGCTTG GTTTAGAGAA TGGACAAACC GTGAAGGTAA AAAATTTGCG CTACGGAGCC
TCTGTAACCG CAACACTCTT TACCACTGAG ATGATTCGCC CCGATACGGT GTTTCTTCCC
TCATCGCATG GTAGCAGCAA CAAGCTCTTG CGTGTAGCTG CCGGTAAAGG CACGCCACTT
AATGAATTAA TGCCGTACAG CATTGAGCCA ATTGCCGCCT CGTTTATGTC GCAAGAGTTC
ACCGTAAGCG TTCAAGCGGT GTAA
|
|---|
| Protein sequence | MSKKITRRDF LKVASLLGGA TLLRPLWGSN SAVPQGGANA VASQVAHANT WVPSICNFCS
SFCNIMVATE ESEGVKRIVK IEGNANSPLN RGKICARGQA GLRQTYDPDR LKQPLIRVQG
SKRGEWRFRA ATWDEAYNYI AAKLMKVNPW EIAMVGGWTA CVSYMHFSLP FTRTLQIPNI
IASPLQHCVT AGHLGTDLVT GNFNVHDEIL ADFEHARYIL FSMNNASVAA ISTARAVRFG
EAKKNGAKVV CLDPRMSELA SKADEWIPIK PGTDHAFFLA FLHLLLREKL YDETFVQKHT
NAPFLAWKDE QGLVHLAGES SNGKPSSYTL FDLNSQRVVT VAGHTNSNER SSGGARLLPA
LHAPEGTVWN GHSVKTVFDF FIEESATFTP EWAAAITDVP ATTIRRIARE FGQARPALVD
PGWMGARYHH VIGQRRLQAI IQTLVGGIDV PGGWLMSGEY HHKAEKMAHG SHSGDVPPVE
KPGMGFAFGL LDIFGNPAAW EHGKPAVSFA WAMEQQKQGK PSVFIPAMAD VGLLESVKGE
LQFNGEPYMT KAFIMNAANP IRHYFPASRW KEMLSHENVE LVVAIDVLPS DTTLYADVIL
PNHTYLERNE PLLYPLGPST DLGYTTRLRS IKPLYNSRDT ADILCEIARR MGKLEPFLDG
VAEYAGLDKA MLQSEINTAT QAGTPLNDAF LKTAYAAMST FAEQVNGTPI SAQEVEATIR
TKGMLLLKSA DAVLEESAMP GKLALPTMSG RLELFSPILA SFAQAAGMQP IFNPVLGYVP
RMMQQSGDKT TLSSNEFYFT YGKTPLVSHA STNTNNTLLV SITAQKEGAL RGLWMNSRKA
TALGLENGQT VKVKNLRYGA SVTATLFTTE MIRPDTVFLP SSHGSSNKLL RVAAGKGTPL
NELMPYSIEP IAASFMSQEF TVSVQAV
|
|---|
| |