| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0942 |
|---|
| Symbol | |
|---|
| ID | 3747095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1278328 |
|---|
| End bp | 1279212 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637773472 |
|---|
| Product | carbon-nitrogen hydrolase family protein |
|---|
| Protein accession | YP_379248 |
|---|
| Protein GI | 78188910 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | [TIGR03381] N-carbamoylputrescine amidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAG AATCTGTTTC AATTGCTGTG GTGCAAAGCG AGTGCAAGGG CGACGCAGTA
GCAAACCGTG CCGAAGCCAC AGCAAAAATT CGAGAAGCTG CCGCACTTGG TGCACAAATC
ATCTGCTTGC AAGAGCTGTT TGTAACCCGC TATTTTTGCC AAACCGAAGC CTATGAGCCG
TTTGGTGAGG CAGAAGCAAT TCCCGATGGA GCAACTACTC GCCTTATGCA AGAGCTTGCG
GCGGAGCTTG GGGTAGTAAT TATTGCCTCC TTGTTTGAAC GCCGTGCACG CGGCTTACAC
CACAACACCG CAGTAGTTAT TGATGCCGAT GGCAGCTACC TTGGCATGTA TCGTAAAATG
CACATTCCCG ACGATCCGGG TTTTTATGAA AAGTTTTACT TCACACCGAG CGACCTTGGT
TACAAGGTTT TTAAAACGCG CTATGCCACC ATTGGCGTGC TTATTTGTTG GGATCAATGG
TACCCTGAAG CTGCTCGTTT AACAGCCTTG AAAGGGGCAG AAATTCTTTT TTACCCAACA
GCAATTGGTT GGGCAACCGA TGAAGATTCA GCCGAAGTTC GCCATGCGCA GCAAAATGCG
TGGATTACCA TGCAGCGCAG CCATGCTATT GCAAATGGTG TTTTTGTAGC CGCCGCAAAC
CGCGTTGGCA CAGAGGAAAA TCTTGAATTT TGGGGCAACA GTTTTATAAG TGATCCTTTT
GGTCAAATGG TTGCCGAAGC GCCCCATCAA CATGAAACAA TTCTGCTTGC CCAATGCGAT
TTGAGCCGTA TTAACTTTTA CCGTTCGCAT TGGCCCTTTT TGCGCGACCG CCGCATTGAA
ACCTATGGCG GTTTACAACA ACGTTTTCTT GATAATAATC AATAA
|
|---|
| Protein sequence | MSKESVSIAV VQSECKGDAV ANRAEATAKI REAAALGAQI ICLQELFVTR YFCQTEAYEP
FGEAEAIPDG ATTRLMQELA AELGVVIIAS LFERRARGLH HNTAVVIDAD GSYLGMYRKM
HIPDDPGFYE KFYFTPSDLG YKVFKTRYAT IGVLICWDQW YPEAARLTAL KGAEILFYPT
AIGWATDEDS AEVRHAQQNA WITMQRSHAI ANGVFVAAAN RVGTEENLEF WGNSFISDPF
GQMVAEAPHQ HETILLAQCD LSRINFYRSH WPFLRDRRIE TYGGLQQRFL DNNQ
|
|---|
| |