Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0935 |
Symbol | |
ID | 3747088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1270957 |
End bp | 1272255 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637773465 |
Product | ribonuclease BN |
Protein accession | YP_379241 |
Protein GI | 78188903 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATGA AAAAAGTGCC ACACATCATT CATCGCGCCA ATCAATCAGG CGGAAAACGC TATGAGCGTA TGGTGGCATT TGTAGCTTTT TTTCGTACCA ATTTATTGCA CGACCGTATT TTTATTAGTG CTGGCTCATT AGCCTTTCAA ACCTTGCTTT CTATAGTACC CGTGCTTGCC GTGGTACTTT CTGTGCTGAA TTTGTTTGAA GTTTTCACGC CATTCCAGCA CTCGCTTGAA ACCTTTCTTG TAGAAAATTT TATGCCTGCC ACAGGACGCT TGCTCCATGG CTATTTGCTC GAATTTGTTG GTAAAACGGG TAACATCCCG CTGCTGGGTT CACTTCTGCT CTTTGTTATT GCTCTCTCCT TACTCTCTAC GGTTGATCAA ACGTTAAACG ATATTTGGGG CATTCGGGCG CCGCGCAAGG CGTTGCAAGG TTTTACGCTT TATTGGACGG TGCTCACCTT AGGTCCATTG TTGATTGTTA GTAGCCTTGC GGCAAGCTCC TATGTTTGGT ACACAATTTT TACGGATGAA GGTGCTTTGT TTGAGCTAAA AACGCGCTTG CTTGCCCTTT TCCCTTTTAT AAACTCCATT GTGGCGTTTT TTCTACTTTA TATGTTGGTG CCAAAACGTC GTGTACGCAT TGCTCATGCC TTTGCAGGGG CGCTTGTGGC TTCGTTGCTG CTGGAGCTTT CAAAACGGTG GTTTCTCTTT TATGTAACAC ATGTTGCTAC GTTTGAGCAC ATTTATGGAG CACTCTCAGT GGTTCCCATG CTTTTTTTCT GGGTCTATCT TGCATGGGTG GTGGTGCTTG TTGGGGCAGA ATTTGTTTAT TGCTTGGGAG CTTTTGCGCC GTCCACTCCA ACGGCTGAAG CTCAAGGCTC CTTGCGTTAC CTTTCGCTAC CGCTTGCAGT ACTTGCAACT CTCCATAACG CCATTGAAAA GGGGGCACCG CTTTCTCTAA AAAGTTTGTC GAGAGAACTT TCAACGCTTC CGTTTAACCT GCTGCGCGAT ATGGTGGATC TGCTTCTTGA TCGTCAAGTG CTGCATCTTT CCACTCGTGG CGAGTTGGCG CTTAGTCGTA ATTTGCACGC TATGAGCCTG TACGAACTTT ACCAAATAAT TCCGCAACCA ATAAACGCAA CAGAAAAGAG CCTACTGTTT TCAGAAAGTA AAAGCGTACA TTTAGCGCCG CTAAGCCTTG AGGTTGAGGC GTGTTTGCAA GAGCGTATGG CAACGCCAAT TGCGGAATTG CTTCAACATT CATTTCTTAA AGCATCAACA GTAGATTAG
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Protein sequence | MLMKKVPHII HRANQSGGKR YERMVAFVAF FRTNLLHDRI FISAGSLAFQ TLLSIVPVLA VVLSVLNLFE VFTPFQHSLE TFLVENFMPA TGRLLHGYLL EFVGKTGNIP LLGSLLLFVI ALSLLSTVDQ TLNDIWGIRA PRKALQGFTL YWTVLTLGPL LIVSSLAASS YVWYTIFTDE GALFELKTRL LALFPFINSI VAFFLLYMLV PKRRVRIAHA FAGALVASLL LELSKRWFLF YVTHVATFEH IYGALSVVPM LFFWVYLAWV VVLVGAEFVY CLGAFAPSTP TAEAQGSLRY LSLPLAVLAT LHNAIEKGAP LSLKSLSREL STLPFNLLRD MVDLLLDRQV LHLSTRGELA LSRNLHAMSL YELYQIIPQP INATEKSLLF SESKSVHLAP LSLEVEACLQ ERMATPIAEL LQHSFLKAST VD
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