| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0929 |
|---|
| Symbol | |
|---|
| ID | 3746853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1263894 |
|---|
| End bp | 1264655 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637773459 |
|---|
| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
|---|
| Protein accession | YP_379235 |
|---|
| Protein GI | 78188897 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAA CTGCAATTAT AGCCGCAAGC GGCATAGGAA AACGCATGAA GCTTGCCAAT
GGTGGCTGCA AGCAAATGCT TGAAATTGGT GGTTTTTCGG TGATTTACCA CACCCTTAAA
GCTTTTGAGC AAGCGCCATC TATTCATAAT ATTTACCTTG CTACTCGTGC TGAAAGCATT
CCGCTTATAC AAGAACTTGC AGCTTCAGCA AATATAGGTA AGTTGACGGC AGTGGTTGAA
GGCGGCAAAG AGCGGCAGGA TTCCATCAAC AATTGCATAA AAGCCATTGA GGTAAAGCGG
CACCAAAGTG GCGTTACGCC CGATGTTATT TTAGTGCACG ATGGCGCTCG CCCCTTTATT
CAGCCTGAAG AAATTGAAGA AATTGCTCGC TTGTCGCTGC TTTTTGGAGC CTGCGTACCA
GCTACTCGCC CTAAAGACAC CATTAAGTTT ATTGGTCACG ATCCCGAATT TTTTGGTGAA
ACGTTAGATC GTAACCGTTT GGTGCAAGTG CAAACGCCGC AAGGTTTTCG TAGTGAATTG
CTAATGCAAG CGCACCAGCA AGCCGAAGCC GAAGGCTGGT ACTCTACCGA TGATGCTGCA
TTAGTGGAAC GCTTTTTTCC CCAGCAGCTC ATTAAGATTT TTGAGATGGG TTACCACAAC
ATCAAAATCA CCACACCCGA AGATATTTTA GTAGCCGAAG CTATTTACCA ACAGCTTCAA
GCTCATGGTA ACGCAACATC TGAAGCCGCA AGTGCATCGT AA
|
|---|
| Protein sequence | MNATAIIAAS GIGKRMKLAN GGCKQMLEIG GFSVIYHTLK AFEQAPSIHN IYLATRAESI
PLIQELAASA NIGKLTAVVE GGKERQDSIN NCIKAIEVKR HQSGVTPDVI LVHDGARPFI
QPEEIEEIAR LSLLFGACVP ATRPKDTIKF IGHDPEFFGE TLDRNRLVQV QTPQGFRSEL
LMQAHQQAEA EGWYSTDDAA LVERFFPQQL IKIFEMGYHN IKITTPEDIL VAEAIYQQLQ
AHGNATSEAA SAS
|
|---|
| |