| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0920 |
|---|
| Symbol | |
|---|
| ID | 3746844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1251366 |
|---|
| End bp | 1252634 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637773450 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379226 |
|---|
| Protein GI | 78188888 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC TGTGGTACCT TGCAACCCGC TTTGCCTTAA AACAGCGCTC CAGCTCAAAA
CCAACCTTTG TGGTAGTTTT AGCAGTTGCA GGTATTGCCG CAGGCACCGC GGCGTTGCTC
TTAACGCTTG CCATTGTTAA CGGTTTTGCG GCAACCATTT CCCAAAAGTT AGTGAGCTTT
AATGCCCATT TACAGCTTCG CCATAGTAGC CAAGAATTTT TTCAAGAGGA GCGCTCCGAA
CGTTTGCAAC TTACCTCGCA TCCCGAAATA ACGCACTTCA CCCCTTTTCT TGAACAACGC
TTTGTGTTAC GGTGTCGCAA TAGTGCCCAG CAAGGGCGAT GGTCAAGCAA AGCAGTGTTG
GTAAAAGCTA TGCCATCGGC TGAACGCCAA AATTTTATAA AGCGCTATAG CGTAAGGGGA
GAGGAGAAAG AATGCCGTGT GGCTGAAGGG ATGGTTGGTA TTTATCTTGG GCGCTCTTTA
GCGGAGGAAC TGAATTGCAA GGTGGGGCAA AAAGTAATGC TGATTCGTGA TAGCAATCAA
GCCTCGCAGC GCCTACTTGC TGATGCTACC AGCCTCCCCG AACTGCTTGC CTCGCTTGCT
ATTGAACCTG CCGTAGTGTG CGGTATTTAC AGCACAGGTT TGCAAGAGGG ATTTGATGAT
TACCTCTTGC TTGCCGATTT ATCGGCATTG GAGCAAAGCC GTAAAGGTTT TATTAGCGGC
TACGAAGCCA ATGTTCGCCA TATAGAGCGT TTGCCTACCA CCGTGCAAGA GTTAACTGCT
CTTACCAACA ATCGCCTCTA CGGCTACACG CTTTTTCAAC GCTATGCTAA TTTATTTGAA
TGGATTAAGT TACAGCAAAA CATTATGCCA CTCTTAATTG TTACCATCAC CGTTGTGGCA
GTCTTTAATA TTATGGCAAC GCTTTTAGTG CTCATTATTG AAAAAACGGG CGAAATTGGA
ATGCTGAGCG CTCTTGGTTT AGCGCCGCAG CGCATTCAAG GGTTGTTTAT GCTTCAAGCG
CTCCTGCTTT CAATAACGGG TATTACACTT GGCAACTTGC TGGCGTTGGG GCTGGCGTTG
TTTGAACAGC ACTACCACCT CATTCGCCTT CCTGAAAAAA GTTACTTTAT TACCGAAGTG
CAGCTTTTAC TTAACCCGAT GGATAACGTT GTGGTGTCGC TGAGCGTTTT AGCGCTCTGC
CTCCTTTTTG CATGGCTACC TTCAACCATT GCAGCCTCCC TAAAACCAGC TCGTGCGTTA
GACGCATAA
|
|---|
| Protein sequence | MKLLWYLATR FALKQRSSSK PTFVVVLAVA GIAAGTAALL LTLAIVNGFA ATISQKLVSF
NAHLQLRHSS QEFFQEERSE RLQLTSHPEI THFTPFLEQR FVLRCRNSAQ QGRWSSKAVL
VKAMPSAERQ NFIKRYSVRG EEKECRVAEG MVGIYLGRSL AEELNCKVGQ KVMLIRDSNQ
ASQRLLADAT SLPELLASLA IEPAVVCGIY STGLQEGFDD YLLLADLSAL EQSRKGFISG
YEANVRHIER LPTTVQELTA LTNNRLYGYT LFQRYANLFE WIKLQQNIMP LLIVTITVVA
VFNIMATLLV LIIEKTGEIG MLSALGLAPQ RIQGLFMLQA LLLSITGITL GNLLALGLAL
FEQHYHLIRL PEKSYFITEV QLLLNPMDNV VVSLSVLALC LLFAWLPSTI AASLKPARAL
DA
|
|---|
| |