| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0894 |
|---|
| Symbol | |
|---|
| ID | 3748084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 1227874 |
|---|
| End bp | 1229610 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637773425 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379202 |
|---|
| Protein GI | 78188864 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1479] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG CAATTTTAGA AAACAGAACA CTTAAAAATA TGGCTGACAA ACATTTAATG
ACACCAAGCA CAACAACTCT CAGTGGGTTA CTTGGCAATG GTTTAACATA CAAAGTTCCT
CTTTTTCAAA GAGATTACTC ATGGAAAATT GACAACTGGA CTGATCTATG GGAAGACATT
AAAATTCTTT TAAATACGGG AAAAGATCAT TACATGGGAG CTGTTGTACT TCAAAAAGTT
GGGGAAAAAC AGTTTTTAAT TATTGATGGA CAGCAAAGAT TTACAACATT GAGTCTTTTG
GCACTTGCTA CAATAAAAAA AATACAAGAT TTAATAGATG CAGGTATTGA GTCAGAAAAT
AATACTGAAA GAATTAATGA ACTCAGAAGA GGATTTTTAG GGCAAAAAGA TCCTGCATCC
TTACATTATT CGAGTAAACT GTTTCTTAAC GAAAACAATG ATCCATTTTA CCAAAGAAAT
TTACTGCAAT TAATTTCACC TCAAAATCAA AAAACGTTAA TTGATTCAAA TCGTTTATTG
TGGCAAGGTT TTGATTTTTT TTATAAACGG ATTGGTGAAC ATTTTCATAA TGCAACAGGT
GCTGAATTAG CAACATTTCT TAGCAAATCA ATTGGAGATA AAACAATGTT TATCAAAATT
GAGGTTGAGG ATGAATTTAG TGCATATACT TTATTTGAAA CTCTAAATTA TAGAGGTGTT
GAGCTTACCG TAAGTGATTT ATTAAAAAAT TACTTGTTTT CATTAATTAC ACCTTCCGAT
TTACGAATTG CAAAAGAGAT TTGGAAAAAA ATAGCTACAA GTGTTGGTAT GGAAAATTTT
CCAATATTTC TACGGCACTT TTGGATTTCA AGAAAACCAC TCGTGCGGCA AGAACAACTT
TTTAAAACTA TTAGAACTGA AGTTGCATCG AATCAACAAG TATTTGACTT ATTGAACAAT
TTAGATGCTT ATTCCGAAAT GTATTTAGCA CTACAAGACC CTTATAATAT TAACTGGCAA
GGTAACAGAG AAAGAATAAA AAGAATTCGA GAGATGAAGT TGTTTGGAGT GAAACAACAA
TTGCCATTAT TAATGGTAGC TAAAGAAAAA TTCTCTGACC AAGAATTCGA CAAAACACTA
AAAGTAATTT CAATTATTTC TTTCCGTTAT AACGTTATTG GCAGCCGTCA AGCTAATAGA
ATGGAAGAAG TTTACAATAT TGTTTCACAA AAAATATTTA ACACAACAAT AACCTCTGCA
CAAGGAGTAT TTAATAATTT AAAAGAACTA TATATTTCAG ATGCTGACTT TCGGAATGAC
TTTTCAACGC TGGAATTATA CTCTTATGGT CAAAGCAAAA AACTTGCAAG ATATATTTTA
TTTGAGTTAG AAAATAATAT GATGCAAGGT GGTGACAGAG ACTATGAACT TGATCCTGCA
ACAATTGAAC ACATATTACC CGAAAATGCG GGTTCTCATT GGGATATAGA TTTTCCTCAA
ATTATTCAAC CAAGTTACAT TTATAGATTA GGGAACTATA CACTTTTAGA AGATCATTTA
AATAGAGATT GTGAAACATT ACTTTTTGAT AAAAAGAAAC CATTTTATGT AAGAAGCCAA
TATGAAATGG CAAAAGCGAT CAATTATAAT GAATGGAATC CTTTGACTTT GGATGCTCGA
CAAAGTGATT TTGCAAAAAA AGCAACATCA ATATGGAGAA TTTCATATGC TGACTAA
|
|---|
| Protein sequence | MIKAILENRT LKNMADKHLM TPSTTTLSGL LGNGLTYKVP LFQRDYSWKI DNWTDLWEDI
KILLNTGKDH YMGAVVLQKV GEKQFLIIDG QQRFTTLSLL ALATIKKIQD LIDAGIESEN
NTERINELRR GFLGQKDPAS LHYSSKLFLN ENNDPFYQRN LLQLISPQNQ KTLIDSNRLL
WQGFDFFYKR IGEHFHNATG AELATFLSKS IGDKTMFIKI EVEDEFSAYT LFETLNYRGV
ELTVSDLLKN YLFSLITPSD LRIAKEIWKK IATSVGMENF PIFLRHFWIS RKPLVRQEQL
FKTIRTEVAS NQQVFDLLNN LDAYSEMYLA LQDPYNINWQ GNRERIKRIR EMKLFGVKQQ
LPLLMVAKEK FSDQEFDKTL KVISIISFRY NVIGSRQANR MEEVYNIVSQ KIFNTTITSA
QGVFNNLKEL YISDADFRND FSTLELYSYG QSKKLARYIL FELENNMMQG GDRDYELDPA
TIEHILPENA GSHWDIDFPQ IIQPSYIYRL GNYTLLEDHL NRDCETLLFD KKKPFYVRSQ
YEMAKAINYN EWNPLTLDAR QSDFAKKATS IWRISYAD
|
|---|
| |