Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0870 |
Symbol | |
ID | 3747582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1200958 |
End bp | 1202160 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637773401 |
Product | ABC transporter, permease protein |
Protein accession | YP_379178 |
Protein GI | 78188840 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAGTT TAGCAGGTCG CGATATTTTG CATGGATGGG TGCGCTTTAT TATGACAGGC TTTGGGCTTG GGCTATTAAT TGGCGTAACG CTCAGTATGG CAGGCATTTA TCGTGGAATG GTGGATGATG CCAATGTGTT GATTGAAAAC AGCGGCGCTG ATTTATATGT GGTGCAGCAA GGTACTATTG GACCTTACGC CGAACCTTCA AGCATCTATC AAGATAGCTA TCGCTCTATT CTTGGAATGG AAGGTGTAGC GCGTGCGGCA AATGTAACCT ACCTCACCAT GCAGGTAAAA GGCAACGGCA GCGATGTGCG GGCAATGGTT GTTGGCATAA CACCGGGCAG TGTAGGGGAG CCAGGGCAGC CCACCTTTCT TGTTGCAGGG CGACATATTA CCGCAAGCCA TTACGAAGCC GTTGCCGACA TCAAAAGTGG CTTTGCGCTT GGCGACACCA TTACCATTCG TCGCCATCAC TACAAAGTGG TAGGATTAAC GCGGCGCATG GTCTCTTCAG GTGGCGATCC CATGATTTTT ATTCCCTTAA AAGATGCGCA AGAGGCACAA TTCTTAAAAG ATAATGATAT GCTGCTTCAG CAACGGCGGC GCACCGCAGC AAATCCTCAA CTTAATCCGC CCGCCAACCC CAGTGTGCTT GATGCCGTTA TTGCCTCGCA AACCACCAAC TTGTCGGTTA ACGCCGTTTT AGTGCAGCTT AAAGAGGGCT ACTTGCCTGA AACTGTTGCC CGCTCTCTTG AACGATGGCA GCGCTTTGAG GTTTATACTC GTGCTGAAAT GCAACAAATT TTAGTTGAAA AAATGATTGC CACCTCCGCA AAGCAAATTG GCATGTTTCT TGTAATTCTT GCCATAGTGA GTGCGGCAAT TATTGCCTTT ATCATTTACA CCATGACGAT GGCAAAAATC CGAGAAATAG CCGTGCTCAA GCTTATTGGC ACGCGCAACC GCGTTATTGC CTCCATGATT TTGCAACAAG CGCTTGGGCT TGGAGCGCTT GGTTTTGTGG TGGGTAAAAT TGTTGCCACA CTCTGGTCGC CCTTTTTCCC GCGCTATGTG TTGCTGTTAC CCGAAGATTC CATTCGTGGG TTTATGATTG TTATGGTGAT TTCTGCCCTT GCCAGCATTC TTGCCATTGC TGCCGCGCTC AAGGTGGATC CCGCAGAAGC TATTGGAGGG TAA
|
Protein sequence | MISLAGRDIL HGWVRFIMTG FGLGLLIGVT LSMAGIYRGM VDDANVLIEN SGADLYVVQQ GTIGPYAEPS SIYQDSYRSI LGMEGVARAA NVTYLTMQVK GNGSDVRAMV VGITPGSVGE PGQPTFLVAG RHITASHYEA VADIKSGFAL GDTITIRRHH YKVVGLTRRM VSSGGDPMIF IPLKDAQEAQ FLKDNDMLLQ QRRRTAANPQ LNPPANPSVL DAVIASQTTN LSVNAVLVQL KEGYLPETVA RSLERWQRFE VYTRAEMQQI LVEKMIATSA KQIGMFLVIL AIVSAAIIAF IIYTMTMAKI REIAVLKLIG TRNRVIASMI LQQALGLGAL GFVVGKIVAT LWSPFFPRYV LLLPEDSIRG FMIVMVISAL ASILAIAAAL KVDPAEAIGG
|
| |