Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0862 |
Symbol | |
ID | 3747572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 1195530 |
End bp | 1196462 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637773391 |
Product | malate dehydrogenase |
Protein accession | YP_379170 |
Protein GI | 78188832 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0390301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA CCGTTATTGG AGCAGGAAAT GTAGGAGCAA CTGCTGCTCT TAAAATTGCT GAAAAACAGT TTGCTAATGA GGTGGTTTTA ATTGATGTGG TTGAAGGTAT TCCACAAGGC AAAGCGCTTG ATATGTATGA ATCTGGTGCC GTATCGTTGT TTGATACAAG GGTTATCGGT TCCAATGACT ATAAAGATTC AGCAGATTCA GATATTATTT TAATTACCGC TGGTTTAGCT CGTAAACCGG GTATGACGCG CGAAGATTTG CTGATGAAAA ATGCAGCAAT CATTAAAGAA GTTACCTCGC AGGTAATGAA GTACTCTACC AACCCGATTA TTGTTATGGT CTCCAATCCT GTGGATATTA TGACCTACGT GGCGCATCGG GTAAGTGGGT TACCAAAAGA GCGGGTTATT GGTATGGGTG GTGTGCTTGA TACGGCACGC TATAAAAATT TTATTGCCGA AACGCTTAAT ATTTCGATGC AAGATATTAG TGCACTTGTG CTTGGTGGGC ATGGTGATGC AATGGTTCCC GTTGTTAATT ATACCAATGT AGCAGGTATT CCGCTTACCG AATTATTACC GTTGGATATT ATTGATGGCT TGGTAGAACG TACTCGGAAT GGTGGTATTG AAATTGTAAA CTACCTTAAA TCAGGCTCTG CATATTATGC GCCAGCCGCA TCAACGGTTG AAATGATTGA GGCAATTGCT CGCGATCGTA AGCGCATTCT GCCTTGTACT ACATTGCTTG ATGGGCAATA TGGCATTAAC AGTGTTTTTT GTGGTGTGCC AGTAAAGTTA GGCAAGAATG GTATTGAGCA GGTGTTGGAA ATTAATCTTT CTGCTCCCGA GCGTTCAGCA TTGCAACGTT CAGCCGATAT TGTAGAGAAG AATTGCAAAA TGCTTGAGAG TTTGTTTGCA TAA
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Protein sequence | MKITVIGAGN VGATAALKIA EKQFANEVVL IDVVEGIPQG KALDMYESGA VSLFDTRVIG SNDYKDSADS DIILITAGLA RKPGMTREDL LMKNAAIIKE VTSQVMKYST NPIIVMVSNP VDIMTYVAHR VSGLPKERVI GMGGVLDTAR YKNFIAETLN ISMQDISALV LGGHGDAMVP VVNYTNVAGI PLTELLPLDI IDGLVERTRN GGIEIVNYLK SGSAYYAPAA STVEMIEAIA RDRKRILPCT TLLDGQYGIN SVFCGVPVKL GKNGIEQVLE INLSAPERSA LQRSADIVEK NCKMLESLFA
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