| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0843 |
|---|
| Symbol | |
|---|
| ID | 3746802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 1171771 |
|---|
| End bp | 1175148 |
|---|
| Gene Length | 3378 bp |
|---|
| Protein Length | 1125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637773372 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379151 |
|---|
| Protein GI | 78188813 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC CGCTTGAAAT GGGATTTGTT GCCGATGACC GCTTGGCTGG TTTTCGACTG
CAACGGCTTG AAATATTCAA TTGGGGCACC TTTGATGGCA GGGTTTGGAC GCTCAAATTG
GGTGGAAAAA ATGGTTTGCT TACGGGCGAT ATTGGCTCTG GAAAATCAAC CGTTGTTGAT
GCTGTAACCA CACTGTTAGT GCCAAGCCAG CGCATTGCTT ACAACAAGGC GGCAGGTGCC
GATAACAAAG AACGCACCTT GCGCTCTTAC GTGCTGGGCT ACTATAAATC GGAGCGGCAG
GAGAACCTTG GCGGTGGTGC AAAACCCGTT GCTCTGCGCG ACCTCAACAG CTATTCGGTG
ATTCTCGGTG TTTTTCATAA CGAAGGTTAC GACAAAACGG TAACGTTGGC GCAACTCTTT
TGGATGAAGG ATGCTGCTCA ACCTGCCCGC CTTTATGCTG CGTATGAAGG CGACCTCTCC
ATTGCCACCG ATTTTTCTAA CTTTGGTGCT GAAATCGCGA CGCTGCGCAA GCGCCTTCGT
GGTGCGGGAG TTGAGCTATT TGAGAGCTTT CCACCCTATG GCGCATGGTT TCGGCGACGC
TTCGGCATTG AGAACGAGCA AGCATTAGAG CTGTTTCATC AAACCGTTTC GTTAAAATCT
GTAGGAAACT TAACGGACTT TGTGCGCCTC CACATGCTTG AACCCTTTAC GGTTGAGCCA
CGTATTGCCG CCCTTATCCA CCATTTTGAA GATCTTAATC GGGCGCACGA AGCGGTGCTC
AAGGCAAAGC GGCAAATTGA GATGCTTGCA CCTTTGGTGG CAGATTGCGA CAATCACCAC
GCTATGGCGC AAAGAACAGA AGAGCTGCGG GCATCGCGCG ACTGCCTTCG CCCTTGGTTC
GCTTCCCTTA AACTTGAATT GCTCGAAAAA CGCCATACTT CGCTTAATGA GGAGCTAAGC
CGCCACCAGA TCGCCATTGA GCGTCTGGAC GGGGAGCGCC GCACCTTGCA GGGGCGCGAT
CGTGAGCTGC GCCGAACTAT TGCTGAAAAC GGGGGCGATC GAATTGAGAG TATTGCGGCT
GAGATTCGGC AGCATCAGCA AGAGCTGGAT CGGCGCACCC AAAAATCAAC CCGATATAAA
GAACTTTTGA GGCAGCTTGG GGGGCAGCTT GGCGAGCATC CCGCAACAAG CGCTGAGGAG
TTTTATCAGC AGCGAGCAGA ACATGCCGCC ATGCACGAAA GTGCGGCTGA AGCTGAAGTA
CAGGTTCAAA ACAATCTGAA CGAAGCAGGT GTGCTCTTTA CCCAAGGGCG TCAGGAGTAT
GAGCAACTGA GCACCGAAAT CAAGAGCTTG AAAGCACGCA TGAGCAACAT TGATGAAAAG
CAAATTGCCA TGCGCCATGC GCTCTGCAAG GCGTTGAATT TGCCTGAGGT GGAGATGCCT
TTTGCGGGCG AATTGCTGCA AGTTCGTGAA GAGGAAACAG CTTGGGAGGG AGCTATTGAA
CGGGTGTTGC GCAACTTTGG GTTGTCGCTT TTAGTGCCCG ACCACCATTA CCCAAAAGTG
GCGGAATGGG TGGAGCGCAC CAATCTGAAA GGCAAACTTG TCTATTTTCG AGTTCGTCCG
CAATCTCGCA ATGAGCAGTT GGCGGATCAT CCCGCTTCAC TTGCCCGCAA GCTTGCCATC
AAAGCCGATT CCACCTATTA CGATTGGATT GAACGGGAAG TTTCCCATCG TTTTGATCTG
ATTTGCTGCA CCACACAAGA GGAGTTTCGG CGGGAGAAAA AAGCCATCAC GCCAGCGGGA
CAAATTAAGT CGCCGGGTGA ACGGCACGAA AAGGATGATC GCCATCGTCT TGACGACCGT
AGCCGCTACG TGCTTGGGTG GAGCAATGCC GCTAAAATTG CTGCCCTTGA AGCAAAGGCG
AAGGTGCAGC AACGTGAGCT TACCAAACTT GCCGAACGCA TCAGCACGTT GCAACAAGAG
CAAAAAGCGC TTAAAGAGCG GCTAACCATT CTCTCCAAGC TTGATGAATA TTCCGATTTC
AACGACCTCG ATTGGCAGCC ATTGGCAGTT GCTATTGCGC GATTAGAAAA GGAAAAAGAG
GAGCTTGAAA AAACCTCCAA TATTCTGCAA ACCCTTACCG AGCAGCTTGC TTTGCTGGAA
CAAGAGCTGC AAAAAACGGA GCAGCAGCTT GACGACCGAA AGGATAAACG CTCTAAAATT
GAGCAGAAAA TTAGCAGCAT CACTGAGTTG CAGCAACAAA CGGCGGCACT GCTTGCAGAA
GCAGGAGACG AAGTAAGCAA CCGTTTTGCC CTCCTTCAAG CAATGCGCCA AGAGGCTTTT
GGCGATCAAT CGCTAACGGT TGAATCGTGT GACAATCGCG AGCGGGAGAT GCGTGAATGG
TTGCAGAATA AAATTGACAG CGAAGATAGA AAGCTCTCTC GATTGGGTGA AAAAATCATT
CGGGCAATGA CCGAATACAA GGAGGAGTGG AAACTTGAAA CCCGCGACGT GGATGTTAAT
ATAGCTGCCG GTAAAGAGTA TCGTGCCATG TTTGAGCAAC TTCAGGCTGA CGATTTGCCT
CGCTTTGAGG GGCGCTTTAA AGAGCTGCTG AATGAGAATA CCATCCGCGA AGTTGCCAAT
TTTCAGTCGC AACTTGCCCG CGAACGCGAA ACCATCAAAG AGCGTATTGT TCGCCTCAAT
GAATCGCTAA CACAAATTGA TTTTAATCCT GGGCGATACA TCACCCTTGA AGCTGAGAAT
AGCCTTGATG CCGACATCCG TGATTTTCAA ACGGAGCTTC GTGCTTGCAC CGAAGGAACG
CTGACAGGCT CGGATGATGC GCAATATTCG GAAGCCAAAT TCCTGCAAGT ACGGCGCATT
ATTGATCGCT TTCAAGGGCG CGAAGCTTAT GCTGACCTCG ACCGTCGCTG GACAGCCAAA
GTAACGGATG TGCGCAACTG GTTTGTTTTT GCCGCCAGCG AACGGTGGCG CGAAGATGAC
ATTGAGCACG AACACTACGC CGATTCAGGT GGTAAATCGG GAGGGCAAAA GGAGAAACTC
GCCTACACCG TGCTTGCCGC CAGCCTTGCC TATCAATTCG GCTTGGAATG GGGCGCCGTG
CGCTCCCGCT CTTTCCGCTT CGTGGTGATT GACGAAGCTT TCGGACGCGG CTCCGACGAA
TCGGCACAAT ATGGATTGCA ACTCTTCGCC CAACTTAACC TGCAACTGCT CATTGTTACG
CCATTGCAGA AAATCCACAT TATTGAACCC TTTGTTGCCA GCGTTGGCTT TGTGCACAAT
CAAGAAGGGC GCTGCTCAGT GTTACGCAAC CTCACCATCG AAGAGTATCG CTCCGAAAAA
GAGAGGGCAA TTGCATGA
|
|---|
| Protein sequence | MSEPLEMGFV ADDRLAGFRL QRLEIFNWGT FDGRVWTLKL GGKNGLLTGD IGSGKSTVVD
AVTTLLVPSQ RIAYNKAAGA DNKERTLRSY VLGYYKSERQ ENLGGGAKPV ALRDLNSYSV
ILGVFHNEGY DKTVTLAQLF WMKDAAQPAR LYAAYEGDLS IATDFSNFGA EIATLRKRLR
GAGVELFESF PPYGAWFRRR FGIENEQALE LFHQTVSLKS VGNLTDFVRL HMLEPFTVEP
RIAALIHHFE DLNRAHEAVL KAKRQIEMLA PLVADCDNHH AMAQRTEELR ASRDCLRPWF
ASLKLELLEK RHTSLNEELS RHQIAIERLD GERRTLQGRD RELRRTIAEN GGDRIESIAA
EIRQHQQELD RRTQKSTRYK ELLRQLGGQL GEHPATSAEE FYQQRAEHAA MHESAAEAEV
QVQNNLNEAG VLFTQGRQEY EQLSTEIKSL KARMSNIDEK QIAMRHALCK ALNLPEVEMP
FAGELLQVRE EETAWEGAIE RVLRNFGLSL LVPDHHYPKV AEWVERTNLK GKLVYFRVRP
QSRNEQLADH PASLARKLAI KADSTYYDWI EREVSHRFDL ICCTTQEEFR REKKAITPAG
QIKSPGERHE KDDRHRLDDR SRYVLGWSNA AKIAALEAKA KVQQRELTKL AERISTLQQE
QKALKERLTI LSKLDEYSDF NDLDWQPLAV AIARLEKEKE ELEKTSNILQ TLTEQLALLE
QELQKTEQQL DDRKDKRSKI EQKISSITEL QQQTAALLAE AGDEVSNRFA LLQAMRQEAF
GDQSLTVESC DNREREMREW LQNKIDSEDR KLSRLGEKII RAMTEYKEEW KLETRDVDVN
IAAGKEYRAM FEQLQADDLP RFEGRFKELL NENTIREVAN FQSQLARERE TIKERIVRLN
ESLTQIDFNP GRYITLEAEN SLDADIRDFQ TELRACTEGT LTGSDDAQYS EAKFLQVRRI
IDRFQGREAY ADLDRRWTAK VTDVRNWFVF AASERWREDD IEHEHYADSG GKSGGQKEKL
AYTVLAASLA YQFGLEWGAV RSRSFRFVVI DEAFGRGSDE SAQYGLQLFA QLNLQLLIVT
PLQKIHIIEP FVASVGFVHN QEGRCSVLRN LTIEEYRSEK ERAIA
|
|---|
| |