| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0828 |
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| Symbol | |
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| ID | 3746827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 1154285 |
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| End bp | 1156732 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637773358 |
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| Product | primosomal protein n |
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| Protein accession | YP_379137 |
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| Protein GI | 78188799 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000150971 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGCAC GCTGTGTTGC TGATCGCTTT TTTAGGGGTG AACCCTTTAG CTTGGTAGTG
CCTGAAGCTT TTTGCGAAGA GCTGCAAGCA GGCTGCATGG TGCTCTTGCT TTCGCTAAAA
GGGCAGGGAT TAATGAGCAT TGGCTATGTG CTCAGTTTGT CGCCCGATGC ACCGCCCGAC
ATGGTTAATG AGGAGCTGCC AAGCTTTGAA ATGGTTGACC TGCTCAATGG CAGCCAACCT
GTACTTAACG GTGAACTGCT GAAGCTTACA AGCTGGATTG CCGATTATTA TTTGACGCGC
CCAATTGATG CCATTCACAC AGCTCTTCCT GTTGCCATTC GCACCACCGT ACACGACGTG
GTTGAAGCTG CTGGTTTTAC TTTGCAAGCC GAACCCACAA AGGTGATGAA CACCGCCTTG
CGCCGCTCGA TTCTCAAGCT GCTTGCCACC AACAAGCAAT TAACGGTAAC ACAGCTCCAA
CGGCGGCTTG GTAAAAAGCA ACTCTACAAA ACAATCTCAC AGCTTGAAAA AGGTGGCTAT
CTTACCCTTT CCAAAAAATT TTCAACCAAA AAGCCAAAAT ATAAAAGCGC TTACCGCTTA
ACCGCTCCCT TGCAAGACGG GGTGTTGGAA AGTGTTGCAA GCGCTAAAAA ACAGCACGCC
ACCCTAAGCA CGCTTGCCGA TCTTTATCCC GAAACGGCAT TTCTTAACGA GTTAGAGGTA
TCACACGCCG TAATACAAGT GCTGCTTAAT AAGGGATTGG TGGAAAAAGT GCAAAAGCGC
ATAGAGAGCA ACTTTTCAAG CGGCTACCGC GAAAGCGCAC AACCGGCAAA AAAGCCTACC
GCACAGCAGC AAAAGGTGCT AAACGAATTG TGCAGCGCTT CGCGCCAAGG GCATTACCAA
ACCTTTTTAC TACACGGTGT TACGGGCAGC GGTAAAACCT TGGTTTACAT TGAATTTTTA
AAGGAGGTGC TTGCTGCAGG GAAAACGGCT ATTGTATTAG TGCCCGAAAT AGCTCTAACA
CCCCAAACCG CGGGACGCTT TCGCGAGCAT TTCCACCACG ACATTGCTAT TCTCCATAGC
GCTATGAGCT TGCAAGAAAA GTATGATGCG TGGCATAGCC TCAAAAGCGG ACGCTGCCGC
ATTGCGCTTG GTGCCCGCTC TACCCTTTTT GCTCCACTTG AAAATCTTGG TGCCATTATT
GTTGACGAAG AGCACGATGG CGCTTATAAG CAAGATCGCT CACCCCGCTA CCACGCCCGC
GACACCGCCG TTATGCGTGC TATGCTTAGC AACGCCATTT GCTTGCTTGG CTCGGCAACT
CCCTCGTTTG AATCGTACCA AAATGCACAA AACGGCAAGT ACCATTTGCT GCGGATGGCA
GAGCGCATTG ATGGCGCAAC CATGCCCACC ATCAGCTTAA TTTGGATGCG CGAAAGCCCC
CGCCGCACCA CCTCAATTTC GGAAATGCTT TACCAGCAGA TTGCCCAACG CATCGAAAAA
AACGAACAGG TGATTTTGCT TCAAAACCGT CGCGGCTTTG CGGGCAGCAT TCTCTGCCTT
GAATGCGGGC ACATTCCGCT CTGCCCCCAC TGCAACATTC CATTGGTATA TCACGCCACC
CACAACCACC TGCGCTGCCA CTATTGCGGG CACACCGAGC GCTACAAAGC AATGTGCAGC
GCCTGCAAAT CCACAGGGCT TTTTTATAAA GGAAGCGGCA CCGAACGCAT TGAAGAGGAG
TTGCAAAAGC TCTTTCCCGA CGAAAAAATT CTCCGCATGG ATGTTGACAC CACCGCTAAA
AAAGGAGCGC ATGGACGCAT TTTGCGGGAA TTCCATGAAC GCAAAGCACG CATTTTGCTT
GGCACACAAA TGGTAGCAAA AGGGTTGGAC TTTCCTGCCG TAACGTTAGT TGGAGTGCTT
ATGGGCGATA TTGGCTTAAA CATCCCCGAC TTTCGTGCAT CGGAACGCAC CTTTGCGCTC
TTAATGCAAG TTGCAGGACG AGCAGGACGA GCCGCTATAC CGGGCGAGGT GCTCATACAG
GTTTACAATA AGGAGAGTGA TGTTTTTACC GCTTTGCTGC ACGGAGATTA CGAACGCTTT
TTTCAGCAAG AGCTTGAAAG CCGCCGCACC CTGCTTTACC CACCAGCCGC CCGCTTAATT
AAGTTTGAAT GCTCCGCTGA TGATGAAGTG CAAGCTGAAG CGGCTGCGAC TTTTTGCAAA
GAAATTGTGC AGCAGCACCT CCCTGAAAAA CAAGGCATGG TGCTTGGTCC AGCACCTGCT
TGCATTGCTA AAATCCGCAA CCGTTTTCGT TACCACGTTC TTGTAAAGTT GATGCTCGGC
AAACTCTCCC CGCTTTTTAT TCGCGAAATG AGCGACACCA TCCACAGCCG CTTTCGCTCC
GCCAATGTGC TGCTTACCGT AGATGTTGAT CCGCAGAGTT TGATGTAG
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| Protein sequence | MYARCVADRF FRGEPFSLVV PEAFCEELQA GCMVLLLSLK GQGLMSIGYV LSLSPDAPPD
MVNEELPSFE MVDLLNGSQP VLNGELLKLT SWIADYYLTR PIDAIHTALP VAIRTTVHDV
VEAAGFTLQA EPTKVMNTAL RRSILKLLAT NKQLTVTQLQ RRLGKKQLYK TISQLEKGGY
LTLSKKFSTK KPKYKSAYRL TAPLQDGVLE SVASAKKQHA TLSTLADLYP ETAFLNELEV
SHAVIQVLLN KGLVEKVQKR IESNFSSGYR ESAQPAKKPT AQQQKVLNEL CSASRQGHYQ
TFLLHGVTGS GKTLVYIEFL KEVLAAGKTA IVLVPEIALT PQTAGRFREH FHHDIAILHS
AMSLQEKYDA WHSLKSGRCR IALGARSTLF APLENLGAII VDEEHDGAYK QDRSPRYHAR
DTAVMRAMLS NAICLLGSAT PSFESYQNAQ NGKYHLLRMA ERIDGATMPT ISLIWMRESP
RRTTSISEML YQQIAQRIEK NEQVILLQNR RGFAGSILCL ECGHIPLCPH CNIPLVYHAT
HNHLRCHYCG HTERYKAMCS ACKSTGLFYK GSGTERIEEE LQKLFPDEKI LRMDVDTTAK
KGAHGRILRE FHERKARILL GTQMVAKGLD FPAVTLVGVL MGDIGLNIPD FRASERTFAL
LMQVAGRAGR AAIPGEVLIQ VYNKESDVFT ALLHGDYERF FQQELESRRT LLYPPAARLI
KFECSADDEV QAEAAATFCK EIVQQHLPEK QGMVLGPAPA CIAKIRNRFR YHVLVKLMLG
KLSPLFIREM SDTIHSRFRS ANVLLTVDVD PQSLM
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